Caldicellulosiruptor changbaiensis: ELD05_06230
Help
Entry
ELD05_06230 CDS
T05905
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ccha
Caldicellulosiruptor changbaiensis
Pathway
ccha03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ELD05_06230 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccha03400
]
ELD05_06230 (uvrB)
DNA repair and recombination proteins [BR:
ccha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ELD05_06230 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ELD05_06230 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Microtub_bd
Flavi_DEAD
UB2H
HEXIM
Kinesin
DUF87
Med8
Motif
Other DBs
NCBI-ProteinID:
AZT90271
UniProt:
A0A3T0D5B7
LinkDB
All DBs
Position
1285209..1287194
Genome browser
AA seq
661 aa
AA seq
DB search
MKKFKLVSDFKPTGDQPKAIEMLTEGILKGEKFQTLLGVTGSGKTFTMAKVIENVQRPTL
VLAHNKTLAAQLCSEFREFFPENAVEFFVSYYDYYQPEAYIPETDTYIEKDSSINDEIDK
LRHSATSALFERRDVIIVASVSCIYSLGSPEDYLNLTLSLRPGMIKDRDEVIRELIRMQY
ERNDIDFRRGRFRVRGDVLEIFPASNTDRAIRVEFFGDEIERITEFDVLTGEVIGRRNHV
AIFPASHYVTTSEKLKRAIKSIEEELEQRLQELRSMGKLVEAQRLEQRTRYDIEMLQEMG
FCKGIENYSRHLTGRPPGSPPYTLLDYFPKDFIMFIDESHVTIPQLRAMYNGDKARKDAL
VEYGFRLPSAYDNRPLTFEEFEEKLNQVIFVSATPGPYELKKSSRVVEQIIRPTGLVDPE
IEVHPVKGQIDHLIGEIRKRVEKNQRVLITTLTKKMAESLTDYLKDVGIRVRYMHSDIDT
IERMQIIRDLRLGKFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRA
ARNVDGKVIMYADRITKAMQKAIDETNRRRKIQIEYNQKHGIVPQTVRKGIRQIIEATIS
VAEEEEKYESIEKDIVQNMSKQEIEEYIKELEQQMKRFAIELEFEKAAKIRDKIFELKKL
L
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtttaagcttgtttcagactttaagccaacaggtgaccaaccaaaagctatc
gaaatgctcactgaaggaattttaaaaggtgaaaagtttcagacactgcttggtgttact
ggttcaggaaagacatttacaatggctaaagtaatagaaaatgtacaaagacccacattg
gttttagctcataataaaacactggctgctcaactttgcagtgagtttagggagttcttt
cctgaaaacgctgtagagttttttgtaagctattacgattattaccagccagaagcttat
atacctgagacagacacgtatattgaaaaggattcgtccatcaatgatgaaatagataaa
cttcgacactctgcaacatctgccttgtttgaaagaagagatgtaataattgtagcaagt
gtctcatgtatttacagcttaggtagtccagaagactatttaaatttaacgttatcatta
agacccgggatgataaaagatagagatgaggtaataagagaactcattagaatgcagtat
gagagaaatgatattgattttagaagaggcaggttcagagtacgaggtgatgtacttgag
atatttcctgcatcaaatactgacagagcaattagggtagagttctttggagatgagata
gaaagaattacagagtttgacgttttgactggtgaggtaattgggagaagaaaccatgtt
gcaatatttcctgcatcgcactatgtcacaacctcagaaaagctcaaaagggcaattaag
agtatagaagaggagcttgaacaaaggcttcaagagctcaggagcatgggcaagcttgtt
gaagcgcaaaggcttgaacaaaggacgcgatatgacatagagatgcttcaggaaatggga
ttttgcaaaggaatagaaaactactcaagacatttaacaggaagacctcccggtagtcca
ccttataccttacttgattattttccaaaagactttataatgttcattgatgagtcgcat
gttacaattcctcagttaagagctatgtataatggagacaaggcaagaaaagatgcgctt
gtagaatatggttttagacttccatctgcatatgacaaccgcccacttacctttgaagag
tttgaagagaagctcaaccaggttatatttgtaagcgcaacacctggtccttatgagctc
aagaaatcgtcaagagtggttgaacaaattataagacccacagggcttgttgaccctgaa
attgaggtacatcctgtcaaaggccaaattgaccatttgattggcgagataagaaaaaga
gtagagaagaaccaaagagttttgattacaacacttacaaagaagatggcagaaagcctc
acagattacttaaaagatgtaggaataagagtaaggtatatgcactcggatattgacaca
atagagcgcatgcagataataagggatttgagacttggcaagtttgacgttttagtagga
ataaacttgcttcgtgaaggacttgatttgccagaagtatcacttgttgccattttagat
gctgacaaagaagggttcttgcgctcagaaacttctcttattcagacaattggacgagct
gcacgaaatgttgatggtaaagtgattatgtatgctgacaggattactaaggctatgcaa
aaggctattgatgagacaaatagacgaagaaaaattcagatagagtacaaccaaaagcat
ggaatagtgcctcaaactgtcagaaaagggatacggcagattattgaagcaactatctct
gttgctgaagaggaagaaaagtatgagagcatagaaaaggatattgtacagaacatgtct
aaacaggaaatagaagagtatataaaagagcttgaacagcagatgaaaaggtttgctata
gaacttgaatttgaaaaagcggctaagataagagataaaatatttgaactaaagaagttg
ctttaa
DBGET
integrated database retrieval system
