Caldicellulosiruptor changbaiensis: ELD05_07050
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Entry
ELD05_07050 CDS
T05905
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccha
Caldicellulosiruptor changbaiensis
Pathway
ccha03420
Nucleotide excision repair
ccha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ELD05_07050
03430 Mismatch repair
ELD05_07050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccha03400
]
ELD05_07050
Enzymes [BR:
ccha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ELD05_07050
DNA repair and recombination proteins [BR:
ccha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ELD05_07050
MMR (mismatch excision repair)
Other MMR factors
ELD05_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
TPR_26
Peripla_BP_2
LPD3
Motif
Other DBs
NCBI-ProteinID:
AZT90421
UniProt:
A0A3T0D5R6
LinkDB
All DBs
Position
complement(1443456..1445600)
Genome browser
AA seq
714 aa
AA seq
DB search
MEWLKELNKEQLEAVLSTEGPLLVLAGAGSGKTKVITYRIAYILNMGLAKPSNILAITFT
NKAADEMKERIKKLVSVESFSEMWVSTFHSACAKILRMEAHNIGFSNNFVIFDMQDKNQL
LKECFTKLNIDEERLELKFVSRLISNFKNMLIDPSDVYKEGNVDPRVVEVYRLYNKLLKE
YNAFDFDDLLYYTIMLFKTNPDILEKYQHKFKYILVDEYQDTNHAQFYLIYLLSQKHRNI
CVVGDDDQSIYSFRGADVRNILEFENVFPDTKVIKLEKNYRSTKIILSAANEVIKNNKYR
KSKSLWTDNNGGEKIYLYSAFDEIDEANFVSMSIKNLIQSGIKPSEIGILYRTNAQSLNF
ENSLSSHSIPYKVVGSLRFYERKEIKDIIAYLRLITNPDDNLSLFRVINVPKRGIGPSTV
EKIKVLSDEYGISAYRLLKEKGNFEFDRRTYAKLYDFILLLERIRTEAESKSVVEVIELV
LDKTKYMESLLSSKNEEDFQRAKNIEQLISAAAMFEEENEDKSLQNFLNSITLNFEEDDS
QKEDKVMLMTVHAAKGLEFEVVFLTGLEEGLFPLMRSENEIELQNELEEERRLCYVAITR
AKRLLVLTYANNRRVFGRFSSRQRSCFIDEIPTKYIQQIYTPLMIIKSSGTQISGNTESS
TKKALAVGDIIQHKKFGIGKVLSVSEDMNEVLIDFEKFGQKRLLLSYANLIKIG
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggagtggttgaaagagttaaataaagaacaattagaggcggttctttcaacagaagga
ccgcttttagtattggccggggctggttctggcaaaacaaaagtaatcacatacagaatt
gcatatatattgaatatggggttagcaaaaccaagcaatatactggctataacatttact
aataaagcagcggatgagatgaaagagcgcataaaaaagcttgtaagtgtggagtctttt
tcggagatgtgggtttctacatttcactctgcatgtgctaagatacttagaatggaagca
cataatataggattttctaataactttgtcatatttgacatgcaagataaaaatcagctt
ttaaaagagtgttttacaaagctaaatatagatgaagagagacttgagcttaagtttgtt
tcaagactgatcagcaatttcaagaatatgttaatagacccttctgatgtttataaagaa
ggaaatgtagacccacgtgttgttgaggtttacaggctttataataaactcttaaaagag
tataatgcttttgactttgacgaccttttgtactatacaataatgctctttaaaacaaac
ccagacatcttagaaaagtatcagcataagtttaaatatattttagtagatgaatatcaa
gatacaaaccatgcacagttttatttgatttatctactttcacaaaaacacagaaatatc
tgtgttgtaggcgatgacgatcagagtatttacagcttcaggggcgcagatgtaaggaac
atattagaatttgaaaatgtttttccagatacgaaggtgataaagcttgaaaaaaattat
cgatctacaaagataatcttgtctgctgcaaatgaggttataaagaacaacaaatataga
aagtcaaaaagtctttggacagataataacggaggcgaaaagatttatctttattcagca
tttgatgagatagacgaagcaaattttgtctcaatgtcaataaagaatcttatacaaagt
ggaattaagccttctgaaataggaatcctatataggacaaatgcgcagtcgctaaacttt
gaaaattctctttcttctcattcaatcccttataaggttgtaggaagtttgcgattttac
gaaagaaaagagataaaggatattattgcatatttaagactcataaccaatcctgatgac
aacttaagtttgtttagagttataaatgtaccaaaaaggggaattgggccaagcacagta
gaaaagataaaggttttgagtgatgagtatggaatttctgcttataggttgttaaaagaa
aaaggaaactttgagtttgacagaagaacctatgcaaagttatatgactttattttactt
ttagaacgcataagaactgaggctgagtcaaagtcagtggttgaggtaattgagcttgtg
cttgataagacaaagtatatggagagcttgctttcaagtaaaaatgaggaagatttccaa
agagcaaagaatatagaacagctaatcagtgcagcagctatgtttgaagaagaaaatgaa
gataaaagcttacaaaactttttaaactcaattaccctgaactttgaagaagatgacagt
caaaaagaagataaagtcatgttaatgacagtccatgctgcaaaaggtttagaatttgaa
gtggtatttttgactggtcttgaagaagggttatttcctcttatgaggtcagaaaatgaa
attgagttgcaaaatgaacttgaagaagaaagaaggctttgttatgtggcaattacaaga
gcaaagaggttattggttctaacatatgcaaacaacagaagagtttttgggcgattttca
tcaaggcaaagatcatgttttattgacgagattccaacaaaatatatccagcagatatat
acaccacttatgattataaaatcttcaggtacacaaatcagtggtaatacagaaagcagt
accaaaaaggctttggctgttggtgatataatacagcacaagaaatttggtattgggaaa
gtattatctgtttcagaggatatgaatgaggtgttgatagactttgagaagtttggacag
aaaagattacttttatcatatgcaaatctcataaagattggttga
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