Caldicellulosiruptor changbaiensis: ELD05_08340
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Entry
ELD05_08340 CDS
T05905
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccha03036
]
ELD05_08340 (smc)
Chromosome and associated proteins [BR:
ccha03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
ELD05_08340 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ATG16
ATG14
ILEI
DUF1664
ABC_tran
EzrA
Motif
Other DBs
NCBI-ProteinID:
AZT90651
UniProt:
A0A3T0D6D4
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All DBs
Position
complement(1679086..1682619)
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AA seq
1177 aa
AA seq
DB search
MYIKWLEIYGFKSFCEKTRIEFEKGITAIVGPNGCGKSNITDAIRWALGEQSLKLLRASK
LEDLIFAGTEKRRSQGFAEVSICFDNSDGKLPIDFEEVVITRRLFRSGESEFFINKTACR
LKDIYELFLDSGLGKDGYSIISQGRVDEIINARPFERYKIFEEACGITKYKYRKEEAERK
LKNTHENILRLQDVIFELKSQLEEIGPEVEKAKAYIELNRKLSDLKREKYLFSYKLASEN
YKSTEAQIESLKEDLEKLTNSKLEIEKRLSEKKLQLDLLTQQLESSKENYSRLKDELAEN
TSKLKFLKKQLEGKFQLLEDITNDLKKIDEEGHEIVRVLSDYKEKLSKKDHIYNQIVEKQ
SKLLEELEDIKDGIFQIENEIQNKETELIEKISQIEKDNQKLNGLLHLKNALLERENRID
EEEKEILNELQRLDKIKTEKELQKSKLEAEKERLSKELDNIKQDIKEREKQLLDVQNKVH
ELSSEMIKKKEKLNVLKAMEENLEGYSKTIKEIFKRVKNLPIDLYGTVGSLINVKRQYVK
AVESALGNAIQHLVVKNESDAKSIIELAKNEKLGKVTIVPIETVVISSSKEDVKAEGFLG
FADEFVEAKEEFRKVIELLVGRTLVFDTIDNAIEYQRKTSYRSRCVTLSGELINPGGIFV
GGEKKADFSLLERKVEKDELETQVLNLTSELDSLEKQILEKSQEVYNLNQKKESIDDKIK
DLISEIDGMEKEIEMCEYKKEQLIQKRGSLENEKKVINDQTTNLQSDIEITRKNIQILED
SKAEIERMASDLKSRLRKLKEDHNLFDNEYRRLLEEKNQIEAEISIFKHKLESAQQSLKN
LEDQKTKKQEQKLKCDQEIKELEGQISEVSHVVEVQKNHLDKLKDEIEKMEKEHSNLAFV
CTKEAEMANKISEEIQSIERRVNSLIIEKNNLENQIGTIKEKYFDLFKEEINLPDGEIEW
SVKKEEEIVNLSSAIEQLGPVNLYSIEQEKRLNERVEFLERQIEDLEKTSKELKNLINEL
DKNMKNIFLENFEKIKFLFSEIFKELFNGGSCDLKLIQSEEEFGVDIDVKPPGKKLQNIN
LLSGGEKALTAIALLFAFLMFKGSLLCILDEIDSSLDEANVQRFAQFLKNLNNQSQIIIV
THRKPTMEIADILYGVTMEEQGVSKVLSLKLEKIQKG
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaatggcttgaaatctatggttttaaatctttttgtgaaaagacacggata
gagtttgaaaaaggcattactgcaatagttggaccaaacggttgtggcaagagcaatatc
actgacgcaattagatgggctttgggtgagcagagccttaaacttttgcgtgcaagtaaa
cttgaagatttaatttttgccgggacagaaaagagaaggtcacaggggtttgcagaggtt
tctatatgctttgacaactctgatggaaaactgcctattgattttgaagaggttgtaatt
acaagaaggctttttagaagcggtgagagcgagttttttatcaacaagacagcctgcagg
ttaaaagacatctacgagctttttcttgattcgggtcttggcaaagatggatattcaatt
atctcccagggcagagttgatgagataataaatgcaaggccatttgaaagatataaaata
tttgaagaggcgtgtggtattacaaagtacaaatacagaaaagaagaggctgagaggaag
ctaaaaaatactcacgagaacatcttaagacttcaggatgtaatatttgagctaaaatct
cagcttgaagaaatagggccagaggttgaaaaagcaaaggcatacatagagctgaataga
aagctgtcagatttaaaaagagaaaagtatctttttagctataaattggcaagcgagaac
tacaagtctacagaagcacagatagaaagtttaaaagaagatcttgaaaagcttacaaat
agcaaactggaaattgagaaaagattgagcgaaaagaagcttcaacttgatttattgact
cagcaacttgaaagttctaaagaaaattacagtagactgaaagatgaacttgctgagaat
acttcaaaactgaaatttttaaaaaaacagcttgaaggcaaatttcagctccttgaggat
ataacaaatgacctcaaaaagattgatgaagaaggtcacgaaattgtaagagttttgtca
gattataaagaaaaactttctaaaaaagatcatatttacaatcagattgtcgaaaaacag
agcaagcttttggaagaattggaagatataaaagatgggatttttcagattgaaaatgag
attcaaaacaaggaaacagagctaatagagaagatatctcagattgaaaaagataatcaa
aagttaaatggccttttgcatctcaagaacgctttgcttgaaagagaaaacagaatagat
gaggaagaaaaagagattttaaatgaacttcaaagactggataagataaagacagagaaa
gaattacaaaaaagtaagttggaagctgagaaggaaagactgtcaaaagagcttgataac
ataaaacaagatataaaggaaagagaaaaacaacttttagatgtacaaaacaaagtacat
gaactttctagtgagatgataaagaaaaaagagaaactaaatgtattaaaggcaatggag
gagaatttagaaggatatagtaaaaccataaaagaaatattcaaaagggtaaaaaacttg
ccaatagacttatatggaactgttggaagcttaatcaatgtaaaaaggcaatatgtaaaa
gctgttgaatcagctcttggcaatgcaatacagcatcttgttgttaaaaatgaaagtgac
gctaagagtattattgagcttgctaaaaatgaaaagcttggaaaagtgacaattgttcca
attgaaacagtagtgatttcgtcttctaaagaagatgtgaaagcagaaggcttccttggg
tttgcagatgaatttgtagaagcaaaagaggaatttaggaaggttatagagctattggtt
ggacgaacgcttgtgtttgatactattgacaatgctatagagtatcaaagaaaaacttca
tatagatcacgatgtgtaactctttctggtgaacttataaaccctggtggaattttcgtt
ggcggtgaaaaaaaagctgacttttctttgcttgaaagaaaagttgaaaaagatgagtta
gaaactcaagttttaaatttgacatctgaactcgatagcttggaaaagcagattttagaa
aagagtcaagaagtatataatttgaatcagaaaaaagaatcaatagatgataaaattaag
gatttaatttccgagattgatggtatggaaaaagagattgagatgtgtgaatataaaaaa
gagcagctaattcaaaaaagagggtctttagaaaatgaaaaaaaggttataaatgatcag
acaactaacctacagagcgacattgagattaccagaaaaaacatacaaatcttagaagat
tcaaaagcagagattgaaagaatggcctcggatttaaagtcaaggcttagaaaattaaaa
gaagatcacaacttgtttgacaatgagtacaggagacttttagaagaaaaaaatcagatt
gaagcagagatttctatttttaagcataagctcgaaagtgcacagcaaagcttaaaaaat
ttagaagatcaaaagacaaaaaaacaagaacagaagttaaagtgtgatcaagagataaaa
gagcttgaggggcaaattagtgaagtttcgcatgtggttgaggtccaaaagaatcatctt
gacaaactaaaagatgagattgagaaaatggaaaaagaacactcaaacttggcttttgtg
tgcactaaagaagccgagatggcaaataaaatatccgaagaaattcaaagtatagagcga
agagtaaatagccttattattgaaaaaaacaacttagagaatcaaattgggaccataaaa
gaaaaatattttgatcttttcaaagaagagataaatttgccagatggggaaattgagtgg
tcagtaaaaaaagaagaagagattgtaaatctctcttcagctattgaacagcttgggcca
gtcaacctttattcaatagagcaagaaaagagactgaatgaaagagtggagtttttggaa
aggcaaattgaagatttagaaaagacaagcaaagagctaaaaaaccttataaatgagctt
gataagaatatgaaaaatatattcttggagaattttgaaaaaataaagttcttgttttca
gagatttttaaagaactattcaatggtggtagctgcgacttaaaactaatccaaagtgag
gaggagtttggtgttgacattgatgtaaaaccacctggcaaaaagcttcaaaatataaac
cttctttctggaggagagaaggccttaactgcaatagctcttctgttcgcatttttaatg
ttcaaaggttctcttttgtgtatattagatgagattgactcaagcttagacgaggcaaat
gttcagagatttgcccagtttcttaaaaatctaaataatcagagccagattataattgtc
actcatagaaaacctactatggagattgcagatatactctatggtgttacaatggaagag
caaggtgtgtcaaaggtgttgtcactcaaattagaaaaaatacagaaaggatga
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