Caldicellulosiruptor changbaiensis: ELD05_08475
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Entry
ELD05_08475 CDS
T05905
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccha03400
]
ELD05_08475
DNA repair and recombination proteins [BR:
ccha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ELD05_08475
Archaeal homologous recombinant proteins
ELD05_08475
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AZT90677
UniProt:
A0A3T0D6H6
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Position
complement(1704483..1705742)
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AA seq
419 aa
AA seq
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MPIRGVHTADLHFGVTTYSKETPDGLGSRVHDFFRTFDRILEYIRQNHIDLLLITGDIFK
DREPNSTLRNMFYKRVVEIAKEGVLVVIVPGNHDMHPFEAKHHSVKVFEIFEQENIVVMD
KLFETRVFDIKGEKLRVIAVPYLYLERFIDKTIPEKIEQLEQNIANFFEEKLTEVLDSSR
DDIPTILAGHFTVNEAEVGSERMIMIGKDVKVPLSVLLHPKLKFVALGHIHKPQILNSKN
PAVVYCGSPDRIDFSETQDQKGFVVFEIGRENFWFEFKPVVVRPFYQLEIDLFEANGDVE
KVLISEIDKKIKKLEENSSANIKASVVKLIIRTQSLLKERLSLTKVEEHLKDRCFILAPI
EIEVTDAKRDFRIVEVDEKSDPIFAFERFLSASPKYKDIKSKDDVVATFKSLFEEVQGD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgccaatacgaggtgttcacacagcagaccttcattttggtgtgacaacatatagcaaa
gagactccagatgggctggggtcgcgtgttcatgattttttcaggacatttgatagaatc
ttagagtatataaggcaaaaccatatagaccttttgctcatcactggtgatatattcaag
gacagagagccgaactctaccttgcgaaatatgttctacaaaagggttgttgagattgca
aaagaaggcgtattggttgtaatagtacctgggaatcatgacatgcacccgtttgaggca
aaacatcattcagtcaaggtttttgaaatattcgagcaagaaaatattgttgtgatggat
aagctttttgaaacaagggtgtttgatataaagggagaaaaactcagagttatagctgta
ccctatctttaccttgaaaggtttatagataaaacaatccctgagaagattgagcagctt
gaacaaaacattgcaaatttcttcgaagaaaaattgacagaggttttagactcctcaaga
gatgatataccgacaatcttggcaggccattttacagtcaatgaagctgaagttggcagt
gaaagaatgattatgatagggaaagatgtaaaagtaccgctttctgtgcttttgcatcca
aaacttaagtttgttgcacttggacatattcacaagccccagattttaaattccaaaaat
ccggcagttgtgtactgtggctcgcctgacagaatagacttttcagaaacacaagaccaa
aaaggttttgtggtatttgaaataggcagagaaaatttttggtttgagtttaagcctgtt
gttgtcaggcctttttatcagcttgaaattgatttgtttgaggcaaatggtgatgtagaa
aaagtgctcatttcagagatagacaaaaaaataaagaaattagaagaaaactcatctgct
aacattaaagcatcggttgtaaagcttataataaggacacagagtttgctaaaagaaaga
cttagtttgaccaaagtagaagagcacttaaaagataggtgtttcattttagccccaatt
gagatagaagttactgatgccaaaagagattttagaattgtcgaggttgatgaaaaatca
gatcctatttttgcatttgaaaggtttttatctgcaagcccaaagtataaagatataaaa
agcaaagatgatgtggttgcgacatttaaatccttgtttgaagaggtacaaggtgactaa
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