Caldicellulosiruptor changbaiensis: ELD05_09130
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Entry
ELD05_09130 CDS
T05905
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
ccha
Caldicellulosiruptor changbaiensis
Brite
KEGG Orthology (KO) [BR:
ccha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccha03036
]
ELD05_09130 (xerD)
Chromosome and associated proteins [BR:
ccha03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
ELD05_09130 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Phage_int_SAM_5
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AZT90787
UniProt:
A0A3T0D6S4
LinkDB
All DBs
Position
complement(1838960..1839835)
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AA seq
291 aa
AA seq
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MKIVEAFYEHLCQKQRFSQNTVMSYLRDIKKYIEFLDNIGMKIEDTSQATIITYIINMQK
SGKSNSTIARAIVSLKVFYEFLKDRNIVDIGKIEIDPPKLERTPPQILTKDEVEKLLSCP
REDDIKGIRDKAMLELLYATGIRVSELIGLNLSDINLEHGYIICRNKKRDRIIPIGSYAI
EAVEKYLNYSRPYLARNKEQEALFLNFNGARMTRQGFWKIVKFYANVAGINKEITPHILR
HSFATHLIENGADVRAVQQMLGHADISTTQRYLQVANVKLKEVYQKAHPRA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtagaggctttttatgaacatctatgccaaaaacagagattttcacaaaat
acagttatgtcttatttgagagatataaagaaatacatagagtttttggataacatcggg
atgaagattgaagatacgtcacaggctactataatcacatatattatcaatatgcaaaaa
agcggaaagtcaaacagcacaatagcaagagcaattgtttcgctaaaggtattctatgaa
tttttaaaggaccggaacattgtagacatagggaaaatagagattgacccgcctaaactt
gaaagaacacctccccaaatcttgacaaaagatgaggtagagaaacttttgagctgtcca
cgagaagatgatataaaaggtataagggacaaggcaatgcttgagcttttgtacgcaaca
ggtataagagtaagtgaactaattggtcttaatctttctgacatcaaccttgaacatggc
tatattatatgcagaaataaaaaaagagataggataattccaattggttcgtatgcaatt
gaggcagtagagaaatacttgaactactcaagaccataccttgcaagaaataaagaacag
gaggctctttttttgaacttcaatggggcaaggatgacaaggcaaggattttggaaaatt
gtaaaattctacgctaatgtggcaggtataaataaggaaataactccgcacatattaagg
cattcttttgcaacacatctaattgaaaatggagcagatgtgagagctgtccagcagatg
cttgggcatgctgatatttcaactactcaaagatatcttcaggttgcgaatgtcaagcta
aaagaggtttatcaaaaagcacatccacgtgcttaa
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