Caldicellulosiruptor changbaiensis: ELD05_09230 Help Entry ELD05_09230       CDS       T05905                                  Name (GenBank) PolC-type DNA polymerase III   KO K03763   DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Organism ccha  Caldicellulosiruptor changbaiensis Pathway ccha03030   DNA replication ccha03430   Mismatch repair ccha03440   Homologous recombination Brite KEGG Orthology (KO) [BR:ccha00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     ELD05_09230    03430 Mismatch repair     ELD05_09230    03440 Homologous recombination     ELD05_09230  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ccha03032]     ELD05_09230    03400 DNA repair and recombination proteins [BR:ccha03400]     ELD05_09230 Enzymes [BR:ccha01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      ELD05_09230 DNA replication proteins [BR:ccha03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     DNA polymerase III holoenzyme      ELD05_09230 DNA repair and recombination proteins [BR:ccha03400]  Prokaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     DNA polymerase III holoenzyme      ELD05_09230 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 Rv2179c-like DNA_pol3_a_NII RNase_H_2 DEDDh_C HHH_3 DUF655 DNA_pol_A_exo1 RecG_wedge GPI ZapA ACOX tRNA_anti-codon T2SSK DUF6282 Motif Other DBs NCBI-ProteinID:  AZT90807 UniProt:  A0A3T0D6T8 LinkDB All DBs Position complement(1856939..1861147) Genome browser AA seq 1402 aa AA seqDB search MSEVAYLPLKPVKVEFDKANKCLKIYIDDIEGLDEINLIELESRFKNSLDICEDVEVKLL NNKVANIKELLQKHKWFLVYKISKKCNGLKAFLKECEITLEDDKLVFLVPNGIRDIMLER RLDVLVKNILSEEFGCKCDVEFRIKDFYIHFDFDSEIESYLKESEEKRKEKEAKEADKKD IQQDPDVIFGKRINEKEEITPISLIKVGSKCIIEGEVFNIEIKETKNQNILVYKLYVTDY NTSTYVKIVAKKDNIPTSISVGDYIKVEGNVEFDEFEKAIVVNAKNVNRAVKPERLDTAE VKRVELHAHTKMSTMDAVCSAEELIKTAAKWGHRAIAITDHGVVQAFPEAQEVSKSEGVK VIYGMECYLIDDGVPVVYNPKENQSLDTTFVVVDIETTGFDNQKDRIIEIGAVKIENGEI VDRFSTFVDPEGKIPIRISELTGIYQNMVDSAPKLSDAILEFEKFCSGAILVAHNAQFDI GFLKRSYQECGLIFDYTYIDTLELSRRVLTDLSSHKLNKVAEFLNIELKHHHRADSDAET TAKIFISLIEKLKSRGYKYLKELNAIETNTKADLKSHSYHATILVKNQQGLKNLYKLVSY SHLEYFYKRPRIPKSVLIQLKDGLILGSACESGEIFRAIMEGKSDEELEKIASLYDFLEI MPVENNSFLIREGYLKDEEQLRQINKKIYQLGKKVNKLVVATSDAHYCHPHQRILRQILK HNQGYNDVENDPYLYFRTTDEMLKEFEYLGKEAAYEVVVENTNKIADMIEDVKPIPDETF PPKIEGAEEEIYNMTMKRAHEIYGEPLPEIVKQRLEKELNSIIKNGFAVMYLIAQKLVSK SLSDGYLVGSRGSVGSSLVATMCGITEVNPLPPHYVCPNCKYSEFVTDGTVGCGYDLEDK DCPRCGTKLRKDGHDIPFETFLGFDGDKEPDIDLNFSGEYQPIAHKFTEDLFGQGYVFRA GTISTVAEKTAHGFVTKYAEEKGLSLHPAEVLRLSQGCTGVKRTTGQHPGGLMIVPKDKE IFDFTPIQHPADSEDKSVITTHFDYHAISGRLLKLDILGHDDPTVIRMLQDLTGVDPRSI PLDDKATLSIFTSTEALGISPEDIDCEVGTFGIPEFGTRFVRQMLIETKPKSFAELVRIS GLSHGTNVWTNNAQDLVRNGIATLKEVISTRDDIMLYLIQKGVPPKDSFRIMEDVRKGKG LKPEDEELLRSYGVPEWYIESCKKITYMFPKAHAAAYVMMAFRIAYFKVHYKEAFYATYF TVRADDFDYATILKGREFIRQKIRDMENRMNTLSQKDKNLLTVLEIANEMLARGLKFYPV DLNESDAEKFIIKDGGLLIPFNALPNVGIAAARNIVEARKEGKFLSIDDLQRRAKLNKQV IEILTQYKVLKDLPQTSQLSFF NT seq 4209 nt NT seq  +upstreamnt  +downstreamnt atgagtgaggtagcttatttaccactcaaacctgtcaaggttgagtttgacaaagcgaat aagtgtctgaaaatatacattgatgatattgaggggttagatgaaataaatttaattgaa cttgaaagtagattcaaaaattccttggatatttgcgaagatgtagaggttaaacttctg aataacaaggttgcgaatataaaagaacttttacagaaacacaaatggtttttggtctat aagatatcaaaaaaatgcaatgggctcaaagcattcttgaaagagtgcgagattacttta gaagatgacaagctcgtatttttagttcctaatgggattagagacataatgcttgaaaga aggttagatgtgcttgtcaagaatattttaagtgaagagtttggctgcaagtgtgatgtt gagtttaggattaaagacttttatattcactttgactttgatagtgaaattgaaagctat ttgaaagagtctgaagagaagagaaaggaaaaggaagcgaaagaagccgataaaaaagat attcagcaagatccagatgtcatctttggcaaaagaattaacgaaaaagaagaaataact cctatttctttaataaaggtaggcagcaagtgtataattgagggtgaagttttcaatatt gagataaaagagacaaaaaaccagaatatactcgtttacaaactgtatgtcacagactac aacacctctacttatgtcaaaattgttgccaaaaaagacaatatcccaacttcaatttct gtgggagattatataaaagttgaaggaaacgttgagtttgatgagttcgaaaaggcaatt gttgtaaacgctaagaatgtaaacagagctgtgaaacctgaaaggcttgacacagctgag gtaaaaagggtagaacttcacgcccacacaaagatgtctactatggatgctgtgtgttca gcagaagagcttataaagactgctgcaaagtggggacacagggcaattgcaattactgac catggtgttgtacaagcattcccagaagcccaggaagtgagtaaaagtgaaggtgttaag gttatatatggaatggaatgctatctgattgacgacggtgtacctgttgtatataatccg aaagaaaaccagagcttagacactactttcgtagttgttgatattgagacaacaggtttt gacaaccaaaaagacaggataattgagattggagctgtgaagatagaaaacggcgagatt gttgatagattttcaacatttgtggacccagaaggaaagattcctattagaatatctgaa ctaacaggcatttaccagaatatggtagatagtgctccaaagctttcagatgctatactg gaatttgagaagttctgcagtggggccattttggttgcacacaatgcacaatttgacatt ggatttttgaagagatcttatcaagaatgtggtcttatctttgactatacatatatagat acattagagctttcaagaagggtgcttacagatttgtcttcgcataagttaaacaaagtg gcagaatttctaaatattgaacttaaacatcatcacagagcagactctgacgctgaaact actgcaaaaatctttataagcctgattgaaaaattaaaaagtcgaggatataagtattta aaagaacttaatgctattgagacaaatacaaaagcagatttgaaatcgcatagctaccat gccacaatacttgtaaaaaatcagcaggggctcaagaacctctataagcttgtttcatat tctcatcttgagtatttttataaacgtccaagaattcccaaaagtgtcttaatacagctg aaagatggtcttattttaggaagcgcatgtgagtcaggagaaattttcagggcgattatg gaagggaaaagcgatgaggagcttgagaagatagcatcactttacgattttcttgagatt atgcctgttgagaataactcttttttgattagagaaggatatttaaaagatgaagagcag ctcagacaaatcaacaaaaagatatatcaacttgggaaaaaagtgaacaagttagttgtt gcaacatctgatgcacattattgccatcctcatcagagaatcttgcggcaaattctaaag cacaaccagggatataatgatgtagaaaatgatccttacttgtactttaggacaactgat gagatgttaaaagagtttgaataccttggcaaagaagcagcctatgaggttgttgttgag aacaccaacaaaattgctgatatgatagaggatgtaaaaccaatacctgatgagacattc ccgccaaagattgaaggcgctgaagaagagatttacaacatgacaatgaaaagagctcat gagatatatggagaaccgcttccggagattgttaagcagagacttgaaaaagagctaaat tctatcataaaaaatgggtttgctgtgatgtatttgattgcgcaaaagcttgtgtcaaag tcgttgtcagatggatacttggttggttcacgtggttctgttggttcatcacttgttgct acgatgtgtggaattacagaggtaaatccactgccaccgcactatgtttgtccaaactgt aagtattctgagtttgtgacagatggaacagttggctgtggttatgaccttgaggacaaa gactgtccaaggtgtggtacaaaacttagaaaagacggacatgatataccatttgagact tttttaggttttgatggtgacaaagaacctgatatagatttgaacttctcaggtgagtat cagcccattgcacataagttcacagaagatctttttggacagggttatgttttcagagca ggtacaatctcaactgttgctgaaaagactgcacatgggtttgttacaaagtatgcagag gaaaaaggactgagcttgcacccggcagaggttttaagactttcgcagggctgcacaggt gttaaacgtacaacaggccagcacccaggtgggcttatgattgttccaaaagacaaagag attttcgactttacaccaattcagcatcctgcagatagcgaggacaaaagtgtaattaca acccactttgactatcatgcaatctctggaagattattaaagcttgatatacttggtcat gacgaccctacagttataagaatgcttcaggacttaacgggagttgacccgcgatcaatc ccacttgatgacaaagccactttgtcaatctttacaagtacagaagcgcttggaatttct cctgaggatattgactgtgaagttgggacttttggcataccagaatttgggacaagattt gtaagacagatgctgatagagacaaaaccaaagtcgtttgctgagcttgttagaatatca gggctttcccatggaacaaatgtgtggacaaataacgcacaggaccttgtcagaaacggc attgcaacgttaaaagaggtaatctccactcgtgatgacataatgctataccttattcaa aaaggtgttccgccgaaagacagttttagaataatggaggatgttcgaaaagggaagggt ttaaaaccagaagacgaagagcttttgagaagctacggtgtgccagagtggtatatagaa agctgtaagaaaatcacatacatgtttccaaaggctcacgctgctgcttatgtcatgatg gcatttaggattgcctactttaaggttcattataaagaagctttctatgcaacatacttc acagtcagagcagatgactttgattatgcaaccatattaaagggaagagagttcataaga caaaagataagagacatggagaatagaatgaataccctatctcaaaaggacaaaaacctt ctgacagtgcttgagatagcaaatgagatgttagcaagaggtcttaagttttatcctgtt gatttgaacgaatcagatgcagaaaagtttataataaaagatgggggacttttgattcca tttaatgccttgccgaacgttggaattgctgctgcacgaaatattgttgaggcaagaaag gaaggaaaatttttgtccattgatgaccttcagagaagagcaaaactaaataaacaggta attgagatattgacacagtacaaggttttaaaggatttacctcagacaagccagctaagt ttcttctaa

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