Cellulomonas chengniuliangii: NP064_00365
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Entry
NP064_00365 CDS
T09092
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
cche
Cellulomonas chengniuliangii
Brite
KEGG Orthology (KO) [BR:
cche00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cche03019
]
NP064_00365 (hrpA)
Enzymes [BR:
cche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NP064_00365 (hrpA)
Messenger RNA biogenesis [BR:
cche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NP064_00365 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
NACHT
nSTAND3
T2SSE
SRP54
HA2_N
HrcA
SLFN-g3_helicase
PhoH
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
UUI75420
LinkDB
All DBs
Position
complement(76504..80799)
Genome browser
AA seq
1431 aa
AA seq
DB search
MRRATAVPPITYPEQLPVSARREDIAAAIRDHQVVIVAGETGSGKTTQLPKIALDLGRGR
EGQIGHTQPRRIAARTVAERIADELGTSIGELVGYQVRFTDESSERTLVKVMTDGILLAQ
IQRDPMLRGYDTLIIDEAHERSLNIDFLLGYLTRLLPQRPELKVIITSATIDSERFARHF
SGPPTAEHPDGVPAPVIEVTGRTYPVEVRYRPLAPDPEPEPEAGGPGAPKAAARGAKKPR
EVEERDPLTAICEAFDELAAEGPGDILVFFSGEREIRDAEEALRSHLGERASDLRRPDAV
EILPLYGRLSAAEQHRVFQQHGNRRVVLATNVAETSLTVPGIRYVIDPGTARISRYSKAT
KVQRLPIEPISQASANQRSGRCGRVADGIAIRLYSEQDFASRPEFTEPEILRTSLASVIL
QMIAVGVATTPDDIAKFPFVDPPDTRSVRDGTQLLTELGALGSGDEAGTGLTRVGRDLAQ
LPMDPRLGRMIVEAGRRGVAREVMIIAAALSIQDPRERPMEQRAQADQSHARFADPTSDF
LTYLNLWQYLKEQQRDLSGSAFRRLCKAEHLNYLRIREWQDVVTQLRELAKPLGIVVNPP
PQRKAPDAAPSGKAAAPAGPRRRTAPGAAQTVLDSDTADGPGTLRLDWDADRIHLSLLAG
LLSQIGMQEATEVTPPAAQRGKRPPGRPDRRGRNEYVGARGARFAIFPGSALAKRPPAWI
MAGELVETSRLWARDAARIQPEWAEELAQHLVKRTYSEPSWSTKQGAAMAMERVLLYGVP
IVAQRRVLYAKHDPEHARELFIRHALVEGEWTTHHEFFHENRRLLREAESLEARARRRDL
VVDDEVLFAFYDERIPADVVSARHFDTWWKTARRADPELLSFTRELLVADDGAAVDESDF
PTTWPQGDLELPLTYQFEPGTDADGVTVHIPLVLLARVRPDGFGWMVPGLREELVTATIR
ALPKPVRVQLVPAPDVARGVVAWFDEHLASWEDTVRAGELAPSFHQAFAQAVRTMRDVEV
PEDAFDDERLPAHLRMTFRVETAGQVVEEGKDLIGLQRRLAHRTQDAVSTAVRTAVRDAM
REVGRGRGAKSPAAADPASASPDASRAVTPAPGSAPSAAPPSPGIPERTGLTTWPDTLPD
GALPLTVETSGPGGLRVRGYPALVEEPDGTVALRVMADPATQVVEHRRGLRRLLLRETAL
ATPRVTTRWSGQQALTLAASPYPSTDALVADVQLAAVDHLLAEHLAGRPATEVRTADAYA
TLRAAVREQIEDTVHRIVTDLVAVLGAARELDAEVRGSSSLALLATLQDVREQAARLVHV
GFVAEVGAARLPHLARYLRAARHRLAKAAGNPDRDASLAWTVAELTREHAAAVSRAEATA
AHAQAVDPDRRAALEAVRWMIEELRVSLFAQQLGTDGPVSEKRIRKALAEA
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccgcgccaccgccgtcccgcccatcacgtaccccgagcagctcccggtctcggcg
cggcgcgaggacatcgccgcggcgatccgcgaccaccaggtggtgatcgtcgcgggcgag
accggctccgggaagaccacgcagctgcccaagatcgcgctcgacctgggccgtggccgc
gaggggcagatcgggcacacgcagccccgccggatcgccgcgcgcacggtcgcggagcgc
atcgccgacgagctcggcacgtccatcggcgagctcgtcggctaccaggtgcgcttcacg
gacgagtcgagcgagcgcaccctcgtgaaggtcatgaccgacggcatcctgctggcgcag
atccagcgggaccccatgctgcgcggctacgacaccctgatcatcgacgaggcccacgag
cgctcgctcaacatcgacttcctgctggggtacctgacccggctgctgccccagcgaccc
gagctcaaggtgatcatcacctcggcgacgatcgactccgagcggttcgcgcggcacttc
tccggcccgcccaccgccgagcacccggacggcgtccctgcgccggtcatcgaggtcacc
gggcgcacgtacccggtcgaggtccgctaccgccccctggcgcccgacccggagcccgag
cccgaggccggcggtccgggcgcgcccaaggccgcggcgcgcggcgcgaagaagccgcgc
gaggtcgaggagcgcgacccgctgacggccatctgcgaggcgttcgacgagctcgcggcc
gagggtccgggcgacatcctggtgttcttctcgggcgagcgggagatccgcgacgcggag
gaggcgttgcgctcccacctcggcgagcgggcctcggacctgcgccggccggacgccgtg
gagatcctgccgctgtacgggcggctgtcggccgcggagcagcaccgggtgttccagcag
cacggcaaccgccgcgtggtgctggccaccaacgtcgccgagacgtccctgaccgtgccg
ggcatccggtacgtgatcgacccgggcacggcgcgcatctcgcggtactcgaaggccacg
aaggtgcagcggctgcccatcgagcccatctcgcaggcgtccgcgaaccagcgctcgggc
cggtgcgggcgcgtcgcggacggcatcgcgatccgcctctactccgagcaggacttcgcc
tcgcggccggagttcaccgagccggagatcctgcgcacgtccctcgcgtcggtgatcctg
cagatgatcgcggtgggggtcgcgaccacgcccgacgacatcgcgaagttcccgttcgtg
gacccgccggacacccgctcggtgcgggacggcacgcagctgctcactgagctgggcgcc
ctcggctcgggcgacgaggcgggcacgggcctgacccgggtgggccgcgacctggcccag
ctgccgatggacccgcgcctgggccggatgatcgtcgaggcgggccgccgcggggtcgcc
cgcgaggtgatgatcatcgccgccgccctgtccatccaggacccgcgcgagcgcccgatg
gagcagcgcgcgcaggccgaccagtcgcacgcgcggttcgccgaccccacgtcggacttc
ctcacgtacctgaacctgtggcagtacctcaaggagcagcagcgggacctgtccggctcg
gcgttccgccgcctgtgcaaggcggagcacctcaactacctgcgcatccgcgaatggcag
gacgtggtgacgcagctgcgcgagctggcgaagccgctgggcatcgtggtgaacccgccg
ccgcagcggaaggcccccgacgcggcgccgtcgggcaaggccgccgcccccgccggtccc
cgccggcgcaccgcccccggcgcagcccagacagtcctcgactccgacaccgccgacggc
cccggaacgctgcggctcgactgggacgcggaccgcatccacctgagcctgctcgcgggc
ctgctcagccagatcggcatgcaggaggccaccgaggtcaccccgcccgccgcgcaacgc
ggcaagcgaccgccaggccgaccggaccgccggggccgcaacgagtacgtcggcgcccgt
ggcgcgcggttcgccatcttccctggatcagccctggccaagcggccgccggcgtggatc
atggccggcgagctcgtcgagacgtcgcggctgtgggcccgtgacgcggcgcgcatccag
cccgagtgggccgaggagctcgcccagcacctggtgaagcgcacctactccgagccgtcg
tggtccaccaagcagggcgccgcgatggcgatggagcgcgtgctgctctacggcgtgccg
atcgtcgcccagcgtcgggtgctctacgccaagcacgacccggagcacgcccgcgagctg
ttcatccggcacgccctggtcgagggcgagtggaccacgcaccacgagttcttccacgag
aaccgccgcctgctccgggaggccgagagcctcgaggcccgtgcccgccgccgtgacctg
gtcgtggacgacgaggtcctgttcgccttctacgacgagcggatccccgccgacgtggtc
tccgcccggcatttcgacacctggtggaagacggcgcggcgcgcggacccggagctgctg
agcttcacccgcgagctgctcgtcgcggacgacggcgccgcggtcgacgagtccgacttc
cccacgacgtggccgcagggcgacctggagctgccgctgacctaccagttcgagccgggc
acggacgcggacggcgtcaccgtccacatcccgctcgtgctgctggcccgcgtgcggccg
gacggtttcggctggatggtccccgggctgcgcgaggagctggtcacggccaccatccgg
gcgctgcccaagccggtgcgcgtgcagctggtccccgcgccggacgtggcccgcggcgtc
gtcgcgtggttcgacgagcacctggcgagctgggaggacacggtgcgcgcgggcgagctc
gcgccgtccttccaccaggcgttcgctcaggcggtccgcacgatgcgcgacgtcgaggtg
cccgaggacgcgttcgacgacgagcggctgccggcccacctgcgcatgacgttccgcgtc
gagaccgccgggcaggtggtcgaggagggcaaggacctcatcgggctccagcgccggctg
gcgcaccgcacgcaggacgcggtgagcaccgccgtccgcaccgccgtgcgggacgccatg
cgcgaggtcgggcgcggccgcggcgcgaagagccctgccgccgccgatcccgcctccgcg
agccccgacgcctcacgcgccgtgacgcctgccccgggctcggcgccctcggccgcccca
ccgtcccccggcatccccgagcgcaccggcctgaccacctggccggacacgctgcccgac
ggcgccctgcctctgaccgtcgagacgtctggccctggcggcctgcgggtgcgcggctac
ccggcgctggtcgaggagccggacgggaccgtcgcgctgcgagtgatggcagatccggcg
acccaggtcgtcgagcaccgccgcggcctgcgccggctgctgctgcgcgagacggccctg
gcgacgccccgcgtgaccacccgctggtcggggcagcaggcgctcaccctggccgcgagc
ccgtacccgagcaccgacgcgctggtggccgacgtgcagctcgccgcggtggaccacctg
ctggccgagcacctggccgggcggccggccaccgaggtccgcacggccgacgcctacgcc
actctgcgggctgccgtgcgggagcagatcgaggacacggtgcaccgcatcgtcaccgac
ctggtggcggtgctcggcgcggcgcgggagctcgacgctgaggtgcgcggctcgagcagc
ctggccctgctggccacgttgcaggacgtccgcgagcaggcggcccgcctggtgcacgtc
gggttcgtcgccgaggtgggcgccgcgcggctcccacacctggcccggtacctgcgcgcg
gcccggcaccggttggccaaggcggccggcaatcccgatcgcgacgcctccctggcgtgg
accgtcgccgagctgacccgtgagcacgcggccgccgtctcgcgggccgaggccacggcc
gcccacgcgcaggccgtcgaccctgaccggcgggcggcgctcgaggcggtgcggtggatg
atcgaggagctccgggtctccctgttcgcgcagcaactcggcacggacgggccggtcagc
gagaagcgcatccgcaaggccctcgccgaggcctga
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