Cellulomonas chengniuliangii: NP064_08380
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Entry
NP064_08380 CDS
T09092
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cche
Cellulomonas chengniuliangii
Pathway
cche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP064_08380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cche03019
]
NP064_08380
03009 Ribosome biogenesis [BR:
cche03009
]
NP064_08380
Enzymes [BR:
cche01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NP064_08380
Messenger RNA biogenesis [BR:
cche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NP064_08380
Ribosome biogenesis [BR:
cche03009
]
Prokaryotic type
rRNA helicases
NP064_08380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
UUI73867
UniProt:
A0ABY5KX78
LinkDB
All DBs
Position
1807564..1809405
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AA seq
613 aa
AA seq
DB search
MTSLPSAALPVTESTEAADAAVTFADLGLPASLERAVADLGFTIPSAIQAEAIPALLSGR
DITGVAQTGTGKTAAFGLPLLAAVDPELREVQALVLTPTRELAMQVAEAIETFAKHLPGV
EVVAVYGGSPFLPQQRALARGAQIVVGTPGRVIDHLERRTLRPDNVRFLVLDEADEMLRM
GFAEDVDKIFNTTPTSRQVALFSATMPPAIRRVAGQHLNNPVEVAVSRQSSTVTSVNQTY
AVVPYRHKAGALARVLAVSDADAAIVFVRTRGAAEEVGSALIERGISAAYISGDVAQGER
EKIVERLRSGALNVLVATDVAARGLDVDRIGLVVNFDAPSEPEAYVHRIGRTGRAGRSGE
ALTFVTPSEQHRLRAIERTTRQKLEEISIPSPADVSAHRVQRLLRDVATRTEAGRLDLYR
TAVTTFLAENPSIEPAELAAVMAALAVGDTGPTARPTHGDDMDDALSRASLSDRGDRHER
SARPSSDGPRRATHRAEGAALRYRIAVGHTHGAQAGAIVGALTNEGGLTGKELGKIDIFP
SFSLVEIPAGLSPEAFDRIGRARVAGRPLRIRVDEGPGPRAGQGASRPAGHRPDPRGERS
DSRDRRPRYPAAR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttgccttctgctgcgctgcccgtgaccgagtcgacggaggcggcagacgcc
gccgtcaccttcgcggacctcggcctccccgcctcgcttgagcgcgctgtggccgatctg
ggcttcacgatcccgtccgccatccaggccgaggccatccccgcgctcctctcgggtcgt
gacatcaccggtgtcgcccagaccggcaccggcaagacggccgcgttcggcctgccgctg
ctcgccgctgtcgacccggagctgcgcgaggtccaggccctggtcctgacaccgacgcgc
gagctcgcgatgcaggtcgccgaggccatcgagaccttcgccaagcacctgccgggcgtc
gaggtcgtcgccgtctacggcggttccccgttcctgccgcagcagcgggcgctggcccgc
ggtgcgcagatcgtggtcggcacccccggtcgcgtgatcgaccacctcgagcgccgcacg
ctgcgccccgacaacgttcgcttcctcgtgctcgacgaggccgacgagatgctccgcatg
ggcttcgccgaggacgtcgacaagatcttcaacacgacgcccaccagccgccaggtcgcg
ctgttctccgcgactatgcccccggcgatccgccgcgtggccggccagcacctgaacaac
ccggtcgaggtcgcggtgtcgcgccagtcgtcgaccgtcaccagcgtgaaccagacctac
gccgtggtgccgtaccgccacaaggccggcgcgctggcccgcgtgctcgctgtgtccgac
gcggacgcggcgatcgtgttcgtccgcacccgtggcgcggccgaggaggtcggcagcgcg
ctgatcgagcgtggcatctctgccgcgtacatctcgggcgacgtcgcccagggcgagcgc
gagaagatcgtcgagcgccttcgcagcggagccctcaacgtcctggtcgcgacggacgtc
gcggcccgcggcctcgacgtcgaccgcatcggcctggtcgtgaacttcgacgcgccgagc
gagcccgaggcctacgtgcaccgcatcggccgcacgggccgcgcgggccggtccggcgag
gccctgacgttcgtcacgccgagcgagcagcacaggctccgcgcgatcgagcgcaccacc
cgccagaagctcgaggagatctcgatcccctcccccgccgacgtctcggcgcaccgcgtg
cagcgactgctgcgcgatgtcgccacccggaccgaggccggtcgtctcgacctgtaccgc
accgctgtgacgacgttcctcgccgagaacccgtcgatcgagccggccgagctcgccgcc
gtcatggccgccctggccgtcggcgacacgggccccacggcccgcccgacccacggcgac
gacatggacgacgcgctgagccgcgcgtccctgtccgaccgcggcgaccgccacgagcgc
tcggcacgcccgtcctcggacggcccgcgtcgggccacgcaccgcgccgagggcgccgcc
ctgcgctaccggatcgcggtgggccacacgcacggcgcgcaggctggggcgatcgtcggc
gccctcaccaacgagggaggcctcacgggcaaggaactgggcaagatcgacatcttcccc
agcttctcgctcgtggagatccccgccggcctgagccctgaggcgttcgaccgcatcggc
cgcgcccgggtcgctggccgcccgctgcgcatccgggtcgacgagggccccgggccccgc
gccgggcagggcgcctcacgtccggcgggacaccgccccgacccgcgtggcgagcgctcc
gactcccgcgaccgtcgcccgcgctaccccgcggcgcgctga
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