Cellulomonas chengniuliangii: NP064_10090
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Entry
NP064_10090 CDS
T09092
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cche
Cellulomonas chengniuliangii
Pathway
cche03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cche00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NP064_10090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cche03019
]
NP064_10090
Messenger RNA biogenesis [BR:
cche03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NP064_10090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UUI74171
UniProt:
A0ABY5KXJ2
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All DBs
Position
complement(2182802..2184487)
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AA seq
561 aa
AA seq
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MSHPHPELSLPPALPSGALRIVALGGLGEIGRNMAVFEYEGRLLVVDCGVLFPEDHQPGV
DLILPDFDYLRDRLDDIEAIVLTHGHEDHIGAVPYLLRLRRDIPLVGSQLTLAFVEAKLK
EHRIAPLTLAVKEGQVEQIGPFECEFVAVNHSIPDALAVAIRTGAGTVLHTGDFKMDQLP
LDGRITDLRAFARLGERGVDLFMVDSTNAEVQGFVTPEREIGPVLDSVFAASRQRIVVAS
FASHVHRVQQVLDAAAAHGRRVALVGRSMVRNMTIAAELGYLHVPDGVLVDQKKIDTVPD
QELVLMCTGSQGEPMAALSRIATNDHKVSVGPGDTVILASSLIPGNENAVFRVINGLTRL
GARVVHSGNAKVHVSGHASAGELLYCYNILRPKNVMPVHGEARHLVANAALAVKSGVPAD
RVVLAEDGVVVDLVDGRASVVGAVPCGYVYVDGSSVGEITDAELKDRRILGDEGFISIFV
VVSSADGKVLAGPQIHARGFAEDDAVFDDILPDVVAALEEAAQRGGSDTHQLQQVVRRIV
GRWVSNRLRRRPMIIPVVVEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccccaccccgaactgagcctgcccccggcgctgccgagcggcgccttgcgc
atcgtcgcgctcggcgggctgggggagatcggccggaacatggcggtcttcgagtacgag
ggccgcctgctcgtcgtcgactgcggcgtgctgttcccggaggaccaccagcccggcgtc
gacctgatcctccccgacttcgactacctccgtgaccggctggacgacatcgaggcgatc
gtcctgacgcacggccacgaggaccacatcggcgcggtgccctacctgctgcgactgcgt
cgggacatcccgctggtcggctcgcagctcacgctcgcgttcgtcgaggcgaagctcaag
gagcaccggatcgcgccgctgaccctcgcggtcaaggagggccaggtcgagcagatcggc
ccgttcgagtgcgagttcgtcgcggtgaaccactcgatccccgacgccctggccgtggcg
atccgcaccggcgccggcaccgtgctccacaccggcgacttcaagatggaccagctcccg
ctcgacgggcgcatcacggacctgcgggcgttcgcgcgactgggcgagcgcggcgtcgac
ctgttcatggtcgactccacgaacgccgaggtgcaggggttcgtgactcccgagcgcgag
atcggcccggtgctggactccgtcttcgccgcgtcgaggcagcggatcgtcgtggcctcg
ttcgcctcgcacgtgcaccgcgtccagcaggtgctggacgccgccgccgcgcatgggcgc
cgggtcgcgctcgtcgggcgctcgatggtgcggaacatgacgatcgcggccgagctcggg
tacctgcacgtgcccgacggcgtgctcgtcgaccagaagaagatcgacacggtgccggac
caggagctcgtgctcatgtgcaccggctcccagggcgagccgatggcggcgctgtcccgg
atcgccaccaacgaccacaaggtcagcgtcggcccgggggacacggtgatcctcgcctcg
tccctgatccccggcaacgagaacgcggtgttccgcgtgatcaacgggctcacccgcctg
ggcgcccgggtggtgcactcgggcaacgcgaaggtgcacgtctcgggccacgccagcgct
ggcgagctgctgtactgctacaacattttgcggccgaagaacgtcatgccggtgcacggc
gaggcccggcaccttgtcgccaacgcggcgctcgcggtcaagtcgggcgtgccggcggac
cgggtggtgctggctgaggacggcgtggtggtcgacctggtcgacggccgcgccagcgtc
gtcggcgcggtgccctgcggctacgtgtacgtggacgggtccagcgtgggggagatcacc
gacgccgagctcaaggaccgccggatcctcggggacgagggcttcatctcgatcttcgtg
gtggtgagctcggccgacggcaaggtcctcgccggcccgcagatccatgcgcgcggcttc
gccgaggacgacgccgtgttcgacgacatcctcccggacgtcgtggccgccctcgaagag
gccgcccaacgcgggggatcggacacccaccagctccagcaggtggtgcgccggatcgtc
gggcggtgggtctcgaaccggctgcgccgccgccccatgatcatccccgtggtggtcgag
gcctag
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