Cellulomonas chengniuliangii: NP064_13720
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Entry
NP064_13720 CDS
T09092
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cche
Cellulomonas chengniuliangii
Pathway
cche03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cche00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NP064_13720 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cche03021
]
NP064_13720 (rpoB)
03400 DNA repair and recombination proteins [BR:
cche03400
]
NP064_13720 (rpoB)
Enzymes [BR:
cche01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NP064_13720 (rpoB)
Transcription machinery [BR:
cche03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NP064_13720 (rpoB)
DNA repair and recombination proteins [BR:
cche03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NP064_13720 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
UUI74831
LinkDB
All DBs
Position
complement(2950176..2953685)
Genome browser
AA seq
1169 aa
AA seq
DB search
MAASRTPSAPSADALAKRTASRRISFAKIHEPLEVPDLLGLQTENFDWLLGNEKWQARVA
TALEQGRQDVPETAGLEEIFEEISPIEDFGGSMSLSFREHRFEPPKYTAEECKEKDFTYA
APLFVTAEFVNYTTGEIKSQTVFMGDFPLMTERGTFIINGTERVVVSQLVRSPGVYFERT
PDKTSDKDVFTAKIIPSRGAWLEFEIDKRDNVGVRIDRKRKQNATVLLKALGMSESEIRE
EFAGFPAVLDTLDKDHVTAEDEALLDLYRKIRPGEPPTIEAGRALIENFYFNPKRYDLAK
VGRYKVNKKLGIDVPLRDSVLSRDDIVATIKYLAALHADVATIDGKRNGEPVAVRVETDD
IDHFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKE
FFGTSQLSQFMDQNNPLAGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETP
EGPNIGLIGSLATYGRINPFGFVETPYRKVVNGVVTDDVHYLTADDEDRYVIAQANAPLE
ANGKFAEDMVLVRRKGGEVEIVPGTAVDYMDISPRQMVSVATALIPFLEHDDANRALMGA
NMQRQAVPLVRSEAPLVGTGMEWRAAVDAGDVIVASKPGVVTEVSADLIVIANDDATTST
YRVAKFRRSNQGTSYNQRVLVDEGARVEKGSVLADGPATDEGELALGRNLLVAFMSWEGH
NYEDAIILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGI
IRIGAEVGAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGTVIE
VRTFNREDGDELPAGVNELVRVYIAQRRKITDGDKLAGRHGNKGVISKILPVEDMPFLPD
GTAVDIVLNPLGVPGRMNVGQVLETHLGWVAKQGWDIEIAEGDDLSWREGVPAIAAKSPA
GNPVATPVFDGVPEGTLTGLLSSTLPNRDGERMVDGTGKARLFDGRSGEPFPDPVAVGYM
YILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEL
LTIKSDDVPGRVKVYEAIVKGENIPDSGIPESFKVLLKEMQSLCLNVEVLSSDGVSIDMK
ENDDEVYRAAEELGIDLSRRPNASNVEEI
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
ttggctgcctcgcgcaccccttctgctccgtccgccgacgcactcgcgaagcgcaccgcg
tcgcgtcgcatctccttcgccaagatccacgagcccctcgaggtccccgacctgctcggt
ctccagaccgagaacttcgactggctgctcggtaacgagaagtggcaggcccgtgtggcc
accgctctcgagcagggacgtcaggacgtcccggagaccgccggtctcgaggagatcttc
gaggagatctcccccatcgaggacttcggcggctccatgtcgctgtccttccgcgagcac
cgcttcgagccgccgaagtacacggccgaggagtgcaaggagaaggacttcacgtacgcc
gccccgctgttcgtcacggcggagttcgtcaactacaccactggcgagatcaagagccag
acggtcttcatgggcgacttcccgctcatgacggagcgtggcacgttcatcatcaacggc
accgagcgcgtcgtcgtctcgcagctcgtccgctcgccgggcgtgtacttcgagcgcacc
ccggacaagacctccgacaaggacgtcttcaccgcgaagatcatcccgagccgcggcgcc
tggctcgagttcgagatcgacaagcgcgacaacgtcggtgtccgcatcgaccgcaagcgc
aagcagaacgccacggtgctgctcaaggcactcggcatgagcgagtccgagatccgcgag
gagttcgccgggttcccggccgtgctcgacacgctggacaaggaccacgtcacggctgag
gacgaggccctgctcgacctgtaccgcaagatccgcccgggcgagccgccgacgatcgag
gccggccgcgcgctcatcgagaacttctacttcaaccccaagcgctacgacctcgcgaag
gtcggccgctacaaggtgaacaagaagctcggcatcgacgtgccgctgcgtgactcggtg
ctctcgcgcgacgacatcgtcgcgacgatcaagtacctcgccgcgctgcacgccgacgtc
gccacgatcgacggcaagcgcaacggcgagcccgtcgcggtgcgcgtcgagacggacgac
atcgaccacttcggcaaccgtcgcatccgcgcggtcggcgagctcatccagaaccaggtc
cgcacgggcctgtcccggatggagcgcgtcgtgcgcgagcgcatgacgacgcaggacgtc
gaggcgatcactccgcagaccctgatcaacatccgcccggtcgtggcgtcgatcaaggag
ttcttcggcacctcgcagctctcgcagttcatggaccagaacaacccgctcgcggggctg
acgcacaagcgtcgtctgtccgcgctgggcccgggtggtctgtcccgcgaccgcgccggc
atggaggtccgtgacgtccacccgtcgcactacggccgcatgtgcccgatcgagactcct
gaaggcccgaacatcggcctgatcggctcgctcgccacctacgggcggatcaacccgttc
ggcttcgtcgagacgccgtaccgcaaggtcgtcaacggcgtcgtcaccgacgacgtgcac
tacctgacggctgacgacgaggaccgctacgtcatcgcccaggcgaacgcgccgctcgag
gcgaacggcaagttcgccgaggacatggtgctcgtccgccgtaagggcggcgaggtcgag
atcgtccccggcaccgccgtggactacatggacatctcgccgcgccagatggtctcggtc
gcgaccgcgctcatcccgttcctcgagcacgacgacgccaaccgcgccctcatgggcgcg
aacatgcagcgccaggccgtgccgctggtccgctccgaggcgccgctggtcggcaccggc
atggagtggcgcgcggcggtcgacgccggcgacgtcatcgtggcctccaagcccggtgtc
gtcaccgaggtctcggccgacctcatcgtgatcgccaacgacgacgcgacgacgtcgacc
taccgggtcgcgaagttccgccgctcgaaccagggcacctcctacaaccagcgcgtgctg
gtcgacgagggcgcgcgcgtcgagaagggctcggtcctcgcggacggcccggcgacggac
gagggcgagctcgcgctcggccgcaacctcctcgtggcgttcatgtcgtgggagggccac
aactacgaggacgcgatcatcctcagccagcgtctcgtgcaggacgacgtgctctcctcg
atccacatcgaggagcacgaggtcgacgcgcgcgacaccaagctgggcccggaggagatc
acgcgggacatcccgaacgtctccgaggaggtcctcgcggacctggacgagcgcggcatc
atccgcatcggcgccgaggtcggcgcgggcgacatcctggtcgggaaggtcacgcccaag
ggcgagaccgagctgaccccggaggagcgcctgctccgcgccatcttcggcgagaaggcg
cgcgaggtccgcgacacgtcgctcaaggtcccgcacggcgagtccggcacggtcatcgag
gtccgcacgttcaaccgcgaggacggcgacgagctgcccgccggcgtgaacgagctggtc
cgggtgtacatcgcccagcgacgcaagatcaccgacggtgacaagctcgccggccgtcac
ggcaacaagggcgtcatctcgaagatcctgcccgtcgaggacatgccgttcctcccggac
ggcaccgctgtcgacatcgtcctcaacccgctcggcgtgcccggccgcatgaacgtcggc
caggtgctcgagacccacctcgggtgggtcgccaagcagggctgggacatcgagatcgcc
gagggcgacgacctgtcgtggcgcgagggcgtcccggcgatcgccgcgaagtccccggcc
ggcaacccggtcgccacgccggtcttcgacggcgtccccgagggcaccctcacgggcctg
ctctcctcgacgctgccgaaccgcgacggcgagcgcatggtcgacggcacgggcaaggcc
cggctgttcgacggccgctccggcgagccgttcccggacccggtggccgtgggctacatg
tacatcctcaagctccaccacctcgtcgacgacaagatccacgcgcgctcgacgggcccg
tactcgatgatcacgcagcagccgctgggtggtaaggcgcagttcggcggccagcgtttc
ggcgagatggaggtgtgggcgctcgaggcgtacggcgccgcctacaccctgcaggagctc
ctgaccatcaagtcggacgacgtccccggacgcgtcaaggtctacgaggcgatcgtcaag
ggcgagaacatccccgactcggggatcccggagtccttcaaggtgctcctcaaggagatg
cagtcgctctgcctgaacgtcgaggtgctgtcctcggacggcgtctcgatcgacatgaag
gagaacgacgacgaggtctaccgcgctgcggaagagctcggcatcgacctctcccgtcgg
ccgaacgccagcaacgtcgaagagatctga
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integrated database retrieval system
