Cohnella cholangitidis: FPL14_02085
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Entry
FPL14_02085 CDS
T07708
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cchl
Cohnella cholangitidis
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cchl03016
]
FPL14_02085 (truB)
Enzymes [BR:
cchl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FPL14_02085 (truB)
Transfer RNA biogenesis [BR:
cchl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FPL14_02085 (truB)
Prokaryotic type
FPL14_02085 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QMV40121
UniProt:
A0A7G5BT37
LinkDB
All DBs
Position
complement(421979..422938)
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AA seq
319 aa
AA seq
DB search
MKQRTEQNWDGVLAIWKPAGWTSHDVVAKARGLLRERRIGHTGTLDPAVTGVLPLCIGRS
TRFVEYLQELPKTYRATLRFGIATDTEDLSGNVIEQKDASFLTGPMMIESALSFIGEIDQ
IPPMVSAVKVNGQRLYDLARQGITVERSSRRVRIYEIDILNVVEGEAPELTFSVTCSKGT
YIRTLCVDIGRKLGVPAVMSELVRTESAGIKQEHCVTLEQIPVLLEQGVLKEKLLVPDAL
LTTIPAATAAYPESLHALQGKRIGAASLQPPPGNAGLLKLYRSDGVFLGLFSVDESRETV
RPVKVFHTSEGQLSDSQSD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacggaccgaacaaaattgggacggcgtattggcgatttggaagcccgcgggc
tggacgtcgcacgatgtcgtagccaaagcgagagggttgctgcgggaacgaaggatcggt
catacgggaacgctagatcccgccgtaacgggagtgcttcctctttgcattggacgttcc
acccgattcgtcgagtatttgcaagagctgcctaagacctaccgcgcaacattgcgattc
gggatcgcgacggacacggaagacctaagcggcaatgtcatcgagcagaaggatgcttcg
tttctcacgggaccgatgatgatcgaatccgctttgtccttcataggggaaatcgatcag
atcccgccgatggtttcggccgtcaaagtcaacggtcaacgactttacgacttggcgaga
caaggaattacggttgaacgatcatccaggcgagttcgaatctatgaaatcgatatcctg
aacgtggtggagggagaagcgccggagctgactttctccgtcacttgttccaaaggcact
tacatacgcacgttatgcgtggatatcgggcgtaagcttggcgttcccgcagtgatgtcg
gagctcgtgcgtacggaaagcgcgggaattaaacaagagcattgcgtgactctagagcag
atccccgttttacttgaacaaggggttttgaaagagaagctgttggttcccgatgcgttg
ctgactacgattcccgccgctaccgcagcttatccggaatctttgcatgcgcttcaggga
aagaggattggagccgcaagtctgcaacctccgcccggcaacgcaggtttattgaagcta
taccggtcagacggggtatttctcgggctgttctctgtcgacgagagtagggaaacggtg
cgtccggtaaaagtgtttcacacttcggagggccagttaagcgacagtcagtccgattaa
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