Cohnella cholangitidis: FPL14_02215
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Entry
FPL14_02215 CDS
T07708
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
cchl
Cohnella cholangitidis
Pathway
cchl02020
Two-component system
cchl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FPL14_02215
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FPL14_02215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchl03021
]
FPL14_02215
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cchl02035
]
FPL14_02215
Transcription machinery [BR:
cchl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FPL14_02215
Bacterial motility proteins [BR:
cchl02035
]
Flagellar system
Flagellar assembly proteins
Stator
FPL14_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
DUF1492
HTH_16
HTH_38
HTH_Mga
DUF7112
PriX
MarR
Motif
Other DBs
NCBI-ProteinID:
QMV40144
UniProt:
A0A7G5BT60
LinkDB
All DBs
Position
complement(450190..450978)
Genome browser
AA seq
262 aa
AA seq
DB search
MVDQTRSRLSHHDLWQRWKEEEDPDARKLLIEHYLPLVDYVSSRMAVGLPKNVTKDDLAS
NGAMGLIDAIEKFDYRRGLQFETYASWRIRGAIIDGLRQGDWVPRSVRDKAKKMEDAYAV
LEQRYLRSASDDEICAYLNISEKEFQQMLQEVAVAAVFSLEDPIREEESETRLSLLVDDK
AVSPESKVHETYLKDSLKYGIEKLTEKERTVVSLFYYEDLSLSEIAEVMCLSPSRISQLH
SKAILRLRGALAKQKEQLLQNG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggtcgatcaaacacgttcccggttatcccatcacgatttatggcagcgatggaaagag
gaagaggatccggacgcgagaaagcttctgatcgagcactatttgccgctcgtggattat
gtatccagtcgaatggcggtcggcttacccaaaaacgtgacaaaagacgacttggcaagc
aatggggccatgggcttgatcgatgcgatcgagaagttcgattatcggcgggggctccag
ttcgagacctatgcctcttggcgaatccgcggggctataatcgacggacttaggcaaggc
gactgggttccccgttcggtacgtgataaagcgaaaaaaatggaggacgcttatgccgtt
ctagaacagagatacttgcgttctgcttcggacgacgaaatttgcgcctatttgaatatt
agcgaaaaagaatttcagcaaatgcttcaggaagtcgcggttgccgccgtgttctcgctt
gaagatcctatacgggaagaagaatcagagactaggctttccctcttggtggacgataaa
gcggtcagtccggaatccaaggtacacgaaacttaccttaaggattctctgaaatacgga
atcgagaagcttacggagaaagaacgcaccgttgtttccctattctattatgaagacctc
tcattaagcgaaatcgcggaagtcatgtgtttgtctccttctagaatttcgcagcttcac
tccaaagcgattttaaggcttcgcggagcgttagctaaacaaaaggaacagctgcttcaa
aacggataa
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integrated database retrieval system
