Cohnella cholangitidis: FPL14_02410
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Entry
FPL14_02410 CDS
T07708
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cchl
Cohnella cholangitidis
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cchl03032
]
FPL14_02410 (topA)
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_02410 (topA)
Enzymes [BR:
cchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FPL14_02410 (topA)
DNA replication proteins [BR:
cchl03032
]
Prokaryotic type
DNA Topoisomerases
FPL14_02410 (topA)
DNA repair and recombination proteins [BR:
cchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FPL14_02410 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_IS1595
Zn_ribbon_recom
Toprim_3
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
QMV40181
UniProt:
A0A7G5BT97
LinkDB
All DBs
Position
complement(483486..485582)
Genome browser
AA seq
698 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKFIVKASMGHIRDLPKSQIGVEVENDFQPKYITIRGK
GSVLKELRDASKKVKKVYLAADPDREGEAIAWHLAHYLEIDEKDACRVVFNEITKQAVKD
AFKNPRPIDMDLVNAQQARRVLDRLVGYKISPLLWKKVKKGLSAGRVQSVAVKLIYDREN
EINAFIPEEYWSITAHLAKEKSAFEAKFHSVHGTKKELKSEAEVKEVLALMKGNDFTVGE
VKEKERQRNPSPPFITSSLQQEAARKLNFRASKTMQIAQQLYEGVDLGKEGTVGLITYMR
TDSTRISPVAQEEAAEYISGKYGSSFLPETPRVYTKKNAGAQDAHEAIRPTSVLRDPESV
KAFTSKDQLRLYKLIWERFVASQMASAVLDTMTVDLSNGPVVFRANGSKLKFAGFMKVYV
EGNDDGTTDEDRLLPALATGDKVGSKEIEPKQHFTQPPPRYTEARLVRTLEELGIGRPST
YAPTLETIQKRNYVAMEEKKFIPTELGELVIQLMEEFFPEILDAEFTANMEGDLDHVEEG
TQDWVNVIGEFYKSFEVRLNFAEDEMKEIEIKDEPSDEICDKCGSPMVYKMGRFGKFLAC
SGFPNCRNTKPIIKETGVKCPKCGEGHVVERRSKKGRVFYGCNLYPGCDYVSWDKPVAKP
CPSCGGLMVEKRVKGEIQYHCTACSHSENVEESEEAAE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcgctcgttatcgtagagtcaccggctaaagccaagacgatcggcaaatat
ttgggaagcaaatttatcgtcaaagcgtccatggggcacattcgcgatttacccaagagc
cagatcggggtagaagtagaaaatgattttcagcccaaatatattacgattcgcggcaag
gggagcgtcctgaaggagcttcgcgatgccagcaaaaaagtcaaaaaagtatatctcgcg
gccgaccccgatagggagggcgaagcgatcgcgtggcatttggcgcattatttggaaata
gacgagaaggatgcttgccgcgtcgtatttaacgaaatcacgaagcaagcggtgaaggat
gcctttaagaatcctcgccccatcgatatggatctcgtgaatgcccaacaagcgagaagg
gtgctcgaccggttggtcggttataaaataagccctctattatggaagaaagtgaagaaa
ggcttaagcgcgggcagagtacaatcggttgcggtcaagctcatttacgaccgcgagaac
gaaatcaacgcgttcattccggaagaatactggagcattaccgcgcatctcgcgaaagag
aagtcggctttcgaagcgaagttccactccgtgcacgggacgaaaaaagagttgaagagc
gaagcggaagtgaaggaagtactagccctcatgaagggcaatgacttcaccgtaggcgaa
gtgaaggagaaagagcggcagcgcaatccgtctcctccgttcattacgagctccttgcag
caggaagcggcccgtaagctaaacttccgtgcttcgaaaacgatgcaaatcgcccaacag
ctctatgaaggggtagatttgggcaaagagggcacagtcggtctcatcacctacatgcgt
acggattctacgcgtatatctcctgtcgctcaggaagaagccgccgaatatatatccggc
aaatacggaagctcgtttttaccggagacgcctcgcgtgtacacgaagaaaaacgccggc
gcgcaagatgcgcatgaagcgattcgtccgacatcggttctccgtgatccggagtccgtt
aaagcctttacttcgaaggatcagctgcgcctatataagctcatttgggaacgtttcgtc
gcgagtcagatggcttccgccgtgcttgatacgatgaccgtcgatctaagcaatggtccg
gtagttttccgcgctaacggttcaaagttgaaattcgccggtttcatgaaggtgtacgtg
gaaggcaacgacgacggaacgacggatgaagaccgtttgctgcctgcgctcgcgaccggg
gataaagtaggctctaaggagattgagcctaagcagcacttcacccaaccgccgccgcgt
tacacggaagccagattagtccgaacgctggaggagctcggcatagggcgcccaagtaca
tacgcgccgacgctggagacgatccagaagagaaactatgtggcgatggaagagaaaaaa
ttcattccgaccgagctcggagagctcgttatccagctgatggaagaatttttcccggaa
attctcgacgctgaatttacggccaacatggaaggcgatctcgaccacgttgaggaaggt
acccaagattgggtcaacgtaatcggcgaattctacaaatcgttcgaggttcggctgaac
ttcgccgaagacgagatgaaggaaatcgagatcaaggatgagccttccgacgaaatctgc
gacaaatgcggcagtccgatggtctataagatgggacgcttcggcaagttccttgcctgc
tccggtttcccgaattgccggaatacgaagccgattatcaaggaaacgggcgttaaatgc
ccgaaatgcggcgaaggtcacgtcgttgagcgccgaagcaagaagggacgggtattttac
ggctgcaacctctatcccggttgcgattacgtttcatgggataaacccgttgcgaagcct
tgccctagctgcggcggcttgatggtcgagaaacgcgtaaaaggcgagattcaatatcac
tgcacggcgtgcagccactcggagaacgtagaggagtctgaagaagccgcagaataa
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