Cohnella cholangitidis: FPL14_03010
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Entry
FPL14_03010 CDS
T07708
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03022
Basal transcription factors
cchl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPL14_03010
09124 Replication and repair
03420 Nucleotide excision repair
FPL14_03010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchl03021
]
FPL14_03010
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_03010
Enzymes [BR:
cchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPL14_03010
Transcription machinery [BR:
cchl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPL14_03010
DNA repair and recombination proteins [BR:
cchl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPL14_03010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QMV40284
UniProt:
A0A7G5BTK0
LinkDB
All DBs
Position
complement(589360..591063)
Genome browser
AA seq
567 aa
AA seq
DB search
MNSTRPLWVQSDGTVLLDGRHPDYEETRDFLREIAELQKRPGEWHTYRLTQVSLWNAAAA
GRDCEYVIRQLTELARNEIPRRLEEEIRSQMSRYGQLRLSFSDGGLTLAAESAELMAMVC
GWETVSSVFASPPRETSVVIHEGSRGWIKRELAARGYPVKDDAGFHAGESLEVAFREVSV
LGKPIHLRDYQADAVKALLGDGRHDGGSGVIVLPCGAGKTWVGMAAIARLKVETLILTSN
GVSVSQWITELLRNTTLSEDEVGEYTGHKKNVKPITVATYQVLTHRRSKDEEYPHLQLFV
NRDWGLIIYDEVHLLPAPVFRMTAEIQATRRLGLTATLVREDGREGDAFALIGPKRYEIP
WKAMEEKGWIAQAACTEVRVPLDPDTAITYANAPKRSRHRIAGENPRKAEVVKSLLERHS
GLQTLIIGQYLDQLRELSRELSLPLITGEMPHRSRKQWFDRFNEGEIDVLLVSKVANFAV
DLPNASVAIQVSGSYGSRQEEAQRLGRIMRPKRSGGGATFYSVVSEGTDEVEFARNRGRF
LLEQGYPYEVDTWESLEKSVSSEEAKP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
ttgaacagtacccggccgttatgggtccaatcggatggcaccgtgcttttggacgggaga
caccccgattacgaggaaacgagagactttttaagagaaatcgccgagcttcagaagcgc
ccgggagagtggcacacttaccgtctgacgcaggtgtcgttatggaacgccgcggcagcg
ggacgggattgcgagtatgtgataagacaattaaccgagctggcgcgcaatgagatcccc
cgtcggttggaagaggagatccgctcgcaaatgagccgatacggccaactccggctaagc
ttttcggacggcggattaactcttgctgccgaatcggcggagctgatggcgatggtatgc
ggctgggaaacggtctcgtcggtttttgcaagtcctcctagggagaccagcgtcgtcatt
catgaaggttcgcgcgggtggattaaacgcgagctggctgcccgtggttatcccgttaag
gacgatgcggggtttcatgccggagaatcgttggaggttgctttccgcgaggtttccgtt
ctgggtaagcccatacatctaagagactaccaggccgatgcggtaaaggccttgctcggg
gacgggaggcacgacggaggaagcggagttatcgttctcccttgcggcgcggggaaaacc
tgggtgggaatggcggcgatcgcccgattaaaagtcgaaacgcttatcctgacctcgaac
ggggtgtcggtatcccaatggataaccgagcttttgcgcaatacgacgttatcggaggat
gaggtcggggaatatacgggtcacaagaaaaacgtcaagcccataacggtggcgacttac
caggtgcttacccacaggcgctcgaaggatgaggaatatccccatttgcagcttttcgta
aatagggactggggcctcattatttacgacgaggttcatttgttgcctgcgccggtgttc
cggatgacggcggaaatccaagcgacgagaagattggggctaacggcgacgctcgtcagg
gaagacgggcgggaaggcgacgcttttgccttgatcggacctaaaagatacgagattcct
tggaaagcgatggaagagaaaggttggatcgctcaagctgcttgcaccgaagtgagggtg
ccgctggatccggataccgcgatcacctatgccaacgcgcctaaacgcagcaggcatcgc
atcgcgggagaaaacccgcgcaaggcagaggtcgtgaaatccttgctggagcgccatagc
ggattgcagaccttaatcatcggtcaatatctcgatcagttacgcgagctttcgcgcgag
ttatcgctgccgctcattaccggcgagatgccgcatcgaagccgtaagcaatggttcgac
cgattcaacgaaggggaaatcgacgtgcttctcgtatcgaaggtagccaatttcgcggtc
gatctgccgaatgcttccgttgctatccaagtatccggcagctatggatcgaggcaagag
gaggcgcagcggttaggaaggatcatgcgccctaaaagatcgggaggcggggcgactttc
tattccgtcgttagcgaagggacggacgaggtggaattcgcgcgcaatcggggtcggttt
ctgttggaacaaggatatccttatgaagtggatacttgggaatcgctcgaaaaatccgtt
tcgtcagaggaggccaagccatga
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