Cohnella cholangitidis: FPL14_03905
Help
Entry
FPL14_03905 CDS
T07708
Name
(GenBank) AAA family ATPase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cchl
Cohnella cholangitidis
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_03905
Enzymes [BR:
cchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FPL14_03905
DNA repair and recombination proteins [BR:
cchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FPL14_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
QMV40438
UniProt:
A0A7G5BU04
LinkDB
All DBs
Position
complement(774307..778251)
Genome browser
AA seq
1314 aa
AA seq
DB search
MTQLTTEWPPKPDNSRWTDEQWAAINADGSNLLVAAAAGSGKTAVLVERIISRIADENRP
LDVDAMLVATFTKAAAAEMKERIRHALEEALEKDPESKHLRRQIALLPRASVTTLHSFCL
EVVERYAPLIGLDPGFRMANETEAELLRMDTLDELFEERYENEGEAGALASLADHFGGER
SDEPLHRLVLELFEYAGSHPWPAFWLRRTAGEFEQAQAESLLGSLWVKSLLEDAVLLLQG
TLHLLRGALRIAHEPGGPEPYIETLFADIDGLEKVTIAFESGTWEDWQAAVANISFGRLK
PCKGDEYDADLIDRVKGIRDSAKKATAKLSEEWLVRSPGQYAAELRALAPAMGQLAELAV
EFGERYEQAKRAKGLLDFSDLEHYALRVLRDPASTPERSIPSLAANGFMERYSEIYLDEY
QDTNEVQEAIVALISRKAPGNVFMVGDVKQSIYRFRLAEPGLFLEKYRTYKAYGEAENSG
NAADPDGLRIDLARNFRSRREILNAVNHVFRLIMHEPVGEMNYDERAELIYGDGYPDGGA
PNPYSVELILLDTAPGAGADAVESGEEIATAPEKADSGSSEGNEDGTGSSEGAEETEDVE
SAQLEARCIAAEIRKLIGADDSGQLPFAVYDGKAKLHRPVQYRDIVILLRAVTALAPTFL
DELKAAGIPAYADLATGYFAATEVDIVLSLLSIIDNPHQDIPLAGVLRSPIGEFTAEQLA
QIRLARRNGSFWEAVNAAAGVMDATGDAASDDLRDRLTGFISRLEQWRDYARKEPLGDLL
WMLYRETGYYDYVGGLPGGGQRQANLRALVNRAVQYERSSRFRGLFRFLRFLGRMRDTGA
DLGAARALGESENVVRIVSIHRSKGLEFPVVFAAGLSRNFNRRDLNGAFLKHKKLGFGPR
MMEKDTRVTYPTLPQLAIRRKLAAEMLAEEMRVLYVALTRPKEKLYLIGTSKNASKQWEQ
WSETAAMAEMTLPTFAVAAAGKYLDWLGPAAVIASGIQDPARKWNCRIVPAKEYTVQSAG
ASEDRPDEGQLWNAVLNGEKVDLEEAGTYERVNRILSWEYEDAASTRLAAKTSITALKNR
LQDTNALVSSERMPEPSVHTDEWNERSEGEGWPESYTAEVRASSTQTYRLRRPRFMSARQ
LTPAERGTAFHLVMQHLPVQEGLTEQQIESLLESLAERRILSEEQRKGVAAAEVAAFCRT
SIYSRICRSSRVWREVPFTFGHDAAAVYPGSISPSSGETVIIQGVIDCLFAEEDGLVLVD
YKTDVLKGMDPKEAAEKHRFQVEKYGEAVSGILDTPVKEAYVYFFDGGHSVRLV
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcagcttacaaccgaatggccgcctaaaccggacaatagccgttggaccgacgag
caatgggccgcgattaacgcggacgggtccaacttgctcgttgcggctgcagccggatcg
ggcaagacggccgtgctcgtcgagaggattatttcgcggatcgccgacgagaatcgtccg
ctcgacgtggatgccatgctcgtcgccacgttcacgaaagccgcagcggcggagatgaaa
gagcgaattcgtcatgcgctggaagaagcgttggagaaagacccggaatccaaacatctg
cgacgccagatcgcgttgctgcctagggcgtcggtcacgacgcttcattccttctgtctg
gaagtcgtggaacgctacgctccgctgatcgggcttgatcccggctttcgcatggcgaac
gagacggaagccgagctgctcaggatggatacgctcgacgagttgttcgaggagcggtac
gaaaacgaaggggaagcaggggcgttagcctcgttggcggatcacttcggaggggaaaga
agcgacgaaccgctgcatcggctagtgcttgaattattcgagtacgcgggaagccatccg
tggccggcattctggcttcggaggacggccggcgagttcgaacaggcgcaagccgagtcg
ctgcttggttcattgtgggtgaagagcttgctcgaggatgccgtgctgctgttgcagggc
acgcttcacctgcttcgcggcgcattgcgcattgcccatgaaccgggaggaccggagccg
tatatcgaaacgttattcgcggacatagacggattggagaaagtgacgatcgcgttcgag
tcggggacttgggaagattggcaagccgcggtcgcgaatatttccttcgggcggctcaag
ccgtgcaagggcgatgaatacgatgccgatctgatcgacagagtcaaagggattcgagat
tcggcgaagaaggcgacggccaagctgtccgaggaatggctcgtccgttcccccgggcag
tatgccgccgaacttcgcgctttggctccggcgatgggacaattggccgagctcgcagtg
gagttcggagagcgatacgagcaagccaagcgggcgaaaggcctgctcgacttcagcgat
ctggagcattacgcgctgcgcgttctgcgggatcccgcgtcgactccggagcggagcatc
ccttccctggcggctaacggtttcatggagcgctactccgaaatctatttggacgaatac
caggacacgaacgaggttcaggaagccatcgttgccctcatctcgcgtaaagctccgggc
aacgtgtttatggtcggggacgtcaaacagagcatttatcgttttcgtttggccgaaccg
ggcttgtttctggaaaaataccgtacgtataaggcgtatggcgaagcggaaaattccggg
aacgctgctgatccggatggattgcggatcgatctggctcgcaacttccgcagccgcaga
gaaatcctgaacgccgttaaccacgtgttcaggcttatcatgcatgaacccgtcggagag
atgaattacgacgaacgcgccgagctgatctacggcgatggatatcccgacggcggcgcg
ccgaatccctattcggtcgaattgattctactggataccgcgccgggagcaggggccgac
gccgtcgaatctggcgaggaaatcgcgaccgcgccggaaaaggcggattccggaagttcc
gaagggaatgaagacggtacgggttcttccgaaggggcggaagagacggaagacgtagaa
tcggcgcagcttgaagcgagatgcatcgcggccgaaatccgcaaattgatcggggcggac
gattcgggacagctcccgttcgcggtttacgacggcaaggcgaagctgcaccgcccggtt
cagtaccgggacatcgtcattctgcttagagccgttaccgcgttagcccctacgtttctg
gacgagctcaaggccgccgggattcccgcttacgcggatctggcaacgggttatttcgcg
gcgacggaagtcgacatcgtgctgtctctgttgtccatcatcgataatccgcaccaggac
attccgctggcgggcgtactgcgttcgcctatcggggagtttacggccgagcagctcgcg
caaatccggttagcccgccgcaacggttcgttctgggaggcggttaacgcggctgccggc
gtcatggacgctaccggcgacgctgcgtcggatgatctgagagatcggctaaccggattc
ataagccgtcttgagcaatggcgagactatgcgcgcaaggaaccgctaggagatctgcta
tggatgttgtatcgcgaaaccggctactatgactacgtaggcgggttgccgggaggcggg
cagaggcaagcgaacttgcgagctctcgtcaaccgggccgtccagtacgaacgttcctcc
agattccggggcctgttccggtttctccgctttttgggccgcatgcgcgataccggagcc
gatctcggagccgcgcgcgcgctcggcgagagcgagaacgtcgtgcgaatcgtatccatc
catcgaagcaaaggactggagttcccggtcgtattcgcggcggggctatcgcgtaatttc
aaccggagagacttaaacggcgctttcttgaaacataagaagctaggattcgggccgaga
atgatggagaaggacactcgcgttacgtacccgacattgccgcagctcgccatccggcgg
aaattggcggcggaaatgctcgccgaggaaatgcgggtgctgtacgtggctttgacccgt
cccaaggagaaactctatctaataggcacgagcaagaacgcctccaagcaatgggagcag
tggagcgaaaccgcggccatggccgagatgaccttgccgactttcgccgttgccgccgcg
gggaagtacttggattggctcggaccggctgcggtcatcgcgagcggcattcaggacccg
gcacggaaatggaattgccgcatcgttccggccaaagagtacaccgtgcaatcggccgga
gcatcggaagaccggcctgacgaggggcaattatggaacgccgtattgaacggagagaag
gttgatttggaagaggccgggacgtatgaacgggttaaccgtattctatcctgggaatac
gaggatgcggcttcgacgcgcttagcagccaaaacctcgataacggctctgaaaaatcga
ttgcaggatacaaacgccctagtctcttccgaacgaatgccggagccatcggttcacacc
gatgagtggaatgaacggtccgaaggggaaggatggccggaatcgtatacggctgaggtt
cgggctagttcaacgcagacgtatcgtcttcgccgtccgcgttttatgtccgcgcgccaa
ctgactcctgccgagcggggaaccgcgttccacttggtcatgcagcatttgccggtacaa
gaaggcttaaccgaacagcaaatcgaaagcttgcttgagagcttggcggagcgcaggatt
ctgtcggaagagcagcgcaagggagtggctgcggcagaggtcgcggcattttgccggacg
tccatctattcgcggatatgccgatcttcgcgggtgtggagggaagtcccgtttacgttc
ggtcatgatgcggcagccgtttaccctggatcgatttcgccttcttcgggagagacggtc
atcatacaaggggttatcgattgtttgttcgcggaagaagacgggctcgtcctcgtagat
tacaaaacggacgtccttaaggggatggatccgaaagaggcggcggagaagcaccgtttc
caagtggagaaatacggcgaggcggttagcggcattctggatacgccggtgaaggaagct
tacgtgtattttttcgatgggggacattccgtacgtctagtctaa
DBGET
integrated database retrieval system
