KEGG   Cohnella cholangitidis: FPL14_05480
Entry
FPL14_05480       CDS       T07708                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
cchl  Cohnella cholangitidis
Pathway
cchl03030  DNA replication
cchl03410  Base excision repair
cchl03420  Nucleotide excision repair
cchl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cchl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    FPL14_05480 (polA)
   03410 Base excision repair
    FPL14_05480 (polA)
   03420 Nucleotide excision repair
    FPL14_05480 (polA)
   03440 Homologous recombination
    FPL14_05480 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cchl03032]
    FPL14_05480 (polA)
   03400 DNA repair and recombination proteins [BR:cchl03400]
    FPL14_05480 (polA)
Enzymes [BR:cchl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     FPL14_05480 (polA)
DNA replication proteins [BR:cchl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     FPL14_05480 (polA)
DNA repair and recombination proteins [BR:cchl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     FPL14_05480 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FPL14_05480 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 HHH_5 DNA_pol_A_exo1 HHH_2
Other DBs
NCBI-ProteinID: QMV44894
UniProt: A0A7G5C6R0
LinkDB
Position
complement(1112757..1115417)
AA seq 886 aa
MDKLVLIDGNSIINRAFYAIPPLTSSKGLHTNAVLGFTTMLLKVLEEEKPSHVLVAFDAG
KVTFRHEGYSEYKGGRQKTPPELSEQFPLLKELLQAFSISQFELAGYEADDIIGTMAKLA
EEQGKSAIIVSGDKDMLQLTTEQVSVWITRKGVSEVEKYTPGAIGEKYGLTPAQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLHEYGTVENVLDHVEEIKGKLRDNIEAHMDDAKMSKQ
LATIYREVPLDYALEDVAWKGYDESVLAGAMRKLEFKNLVERLNLAGADEASEAENAETA
SQYEVIRVDTAGWDGLNKALTSAEAVLVESSGDNPHHAAGIGILIVAGTECYAVPYSLLL
SPEAASLRAWLENADAPKVSYDLHRVELVLASSGIALTGQAFDVQLAAYLLDPTEADPSL
HGLLQRNGLAPIPSDEAVYGKGAKARIPAEEALAKHLAAKADAIRRLKPHLAEKLEELGM
NRLYYELEQPLSGVLAGMEKQGITVKAEALQELGTEFQRRIEQMTKDIFDLAGFEFNIGS
TRQLGEVLFERLGLPVIKKTKTGYSTDAEVLEKLEPYHEVVRLILHYRQLTKLQSTYIEG
LLKEIQPSTGKIHTFYKQTIAATGRLSSQFPNLQNIPIRMEEGRQIRKAFVPSEPGWSIL
AADYSQIELRVLAHISGDDGLKEAFVNKMDIHTKTAMDVFGVPADQVDSNMRRQAKAVNF
GIVYGISDWGLSQNLNITRGEAAEFIEQYFQAFPGVRKYMVDIVEKARNDGYVTTLMDRR
RYLPEIRHSNFNLRSFAERTAMNTPIQGTAADIIKLAMMRMNEALLERGLRSRMLLQVHD
ELVFEVPQEELEIMKELVPEVMSTALELDVPLLAEVSVGSNWYEAK
NT seq 2661 nt   +upstreamnt  +downstreamnt
atggacaagctggttttaatcgatggcaacagcatcattaatcgcgctttttacgcgatt
ccgcctttgacgagcagcaaagggctgcatacgaatgccgttcttgggtttacgacgatg
ctgcttaaagttctggaggaagaaaagccaagccacgtgctcgtcgcattcgatgcgggg
aaagttactttccgtcatgaagggtattccgagtataaaggcggccgccagaaaacgcct
cccgagctatcggagcaattcccgctgctgaaggaacttcttcaagcgttctcgatctcg
cagttcgagcttgcgggctacgaagcggacgatattatcggaacgatggcgaagctggcg
gaggagcaaggcaagtccgcgatcatcgtgtccggggacaaagatatgctgcagttgacg
acggagcaagtaagcgtatggattacgcgcaaaggagtcagcgaggtagagaaatatacg
ccgggcgcaatcggcgagaaatacggtcttactcccgctcagattatcgatctgaaaggg
ctaatgggagacgcgagcgataatattcccggcgtgcccggggttggcgagaagacggca
ttaaagctgctgcatgaatacggcacggtcgagaacgttctggatcatgtcgaagaaatc
aaaggcaagctgcgcgacaatatcgaagcccatatggacgacgctaagatgagcaagcaa
ctcgcgacgatataccgcgaagttccgcttgattacgcgctagaggatgtcgcatggaaa
ggttacgacgagtcggtgctggcgggcgcgatgcggaagctggaattcaaaaacctcgtc
gagagattgaatttggcaggggcggacgaggcatcggaagcggagaacgcggagacggct
tcccaatatgaggttatacgggtagatacggccggttgggacggtctaaacaaggcgtta
accagcgcggaagcggtactcgtcgagtcttccggagacaatccccaccacgcggcagga
atcgggatattgatcgttgcgggtaccgaatgttatgcggttccttattcgttgctgctc
tcgcctgaggcggcatctcttagagcttggctcgaaaatgccgatgctccgaaggttagc
tacgacttgcatcgcgtggagcttgtattggcaagttcgggcatcgccttgacggggcaa
gcgttcgacgtgcagctcgcggcgtatttgctcgaccctaccgaagcggatccgtccctt
catggcttgctgcagcgtaacggcctggcgcctatcccgtcggacgaagccgtgtacggc
aaaggcgcgaaggctcgtattccggcggaagaagcgctggctaagcatttggccgccaaa
gccgatgcgattcgcaggttgaagccgcaccttgccgagaagctggaagaactcggaatg
aatcggctatactacgagctcgaacagcctttgtccggcgtgcttgccggaatggagaag
caagggataacggtaaaggcggaagcgttgcaggagttaggaacggagtttcagcggcgg
atcgaacaaatgacgaaggacatattcgatttggccggtttcgagttcaacatcggttcg
actaggcaattgggagaagtgttattcgagcggctggggcttcccgtcatcaagaagacg
aagacgggctattctaccgatgcggaagtactggagaagctggagccgtaccatgaggtc
gtacgtttgatcctgcattatcgccagttgacgaaactgcaatcgacctatatcgaagga
ctgcttaaagaaattcagccgtctaccggcaagattcatacgttctataaacaaacgata
gcggcgacgggaaggctgtccagccaattcccgaacctgcaaaatataccgattcgcatg
gaagaggggcgtcaaatccgcaaagctttcgtgccgtcggagcccggttggtcgattctc
gcggcagactactcgcagatcgaattgcgcgtattggcgcatatatccggagatgatggc
ctcaaggaagcgttcgtgaacaagatggacatccatacgaaaaccgcgatggacgtcttc
ggggttcccgccgatcaagtggactccaacatgcgccgtcaagcgaaagcggtcaatttc
ggaatcgtatacgggataagcgattgggggctgtcccagaacctgaacattacccgcggc
gaggcggccgaattcatcgaacagtatttccaagccttccccggcgtacgcaagtatatg
gtggatatcgtggagaaagcgaggaacgacggttatgtgacgacgctaatggatcgtcgc
cggtatttgccggaaatccgccattccaactttaatctgcgctcttttgcggaacggacg
gccatgaatacgccgatacaaggaaccgcggcggatattatcaagctggcgatgatgcgc
atgaacgaagctcttctcgaacgtggactgcggagccgaatgctgctgcaggtacacgat
gaattggtgttcgaggttccgcaagaggagctggagatcatgaaggagttagtgccggaa
gtgatgagtacggctctggagctggatgtgccgctattggcggaagtcagcgtaggaagc
aactggtacgaagcgaaataa

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