Cohnella cholangitidis: FPL14_05705
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Entry
FPL14_05705 CDS
T07708
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03030
DNA replication
cchl03430
Mismatch repair
cchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FPL14_05705
03430 Mismatch repair
FPL14_05705
03440 Homologous recombination
FPL14_05705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cchl03032
]
FPL14_05705
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_05705
Enzymes [BR:
cchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FPL14_05705
DNA replication proteins [BR:
cchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FPL14_05705
DNA repair and recombination proteins [BR:
cchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FPL14_05705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
QMV40753
UniProt:
A0A7G5BUW9
LinkDB
All DBs
Position
complement(1165379..1168999)
Genome browser
AA seq
1206 aa
AA seq
DB search
MCDFVHLHVHSEYSLLDGAARIKEMAAKAAELGMTSLALTDHGVMYGAIPFYKACLEHGI
KPIIGMEAYITAGSRHDKQSRKEQPTYHLTLLAKNETGYRNLMKLTSIGHLEGFYYRPRI
DFEALSAHAEGLVCLSGCMSSELSRQLMDDNEEAAKATAMRYRDLFGEDYYLEIQDHGIL
DQKKITAGVLKLSEELGIPLAATNDSHYICEEDNSLQDVLMCIGTGKTVDDPDRFKISTN
QLFLKSGEEMAALFRHVPEAIANTVKIADSCSLELEFGKHVLPAFNPLPEGSSAARYLEE
LCMAGLRERFEGLPEWEDAEYRSAAEERLRYELRVIGEMGFDDYFLIVWDFIRYAHEHGI
VTGPGRGSSAGSLVAYVLKITDVDPLKHKLLFERFLNPERVSMPDIDIDFSDERRDEVIR
YVVEKYGAAHVAQIITFGTLAARAAVRDVGRVLNLPYGEVDKTAKLIPGMPGMSIERAMK
ENAEFRALAEGGSGAAELIAMAKRVEGMPRHASTHAAGVVISSDPLTDYVPLQEGTDGVP
LTQYSMENLEAVGLLKMDFLGLRTLSIIERSLVSIREQTGRELRWEEVSYEDKDTYELMG
RGETTGIFQLESSGMRRVLKEMKPSSFEDVVSAVALYRPGPMEFIPQFIRAKHGLIEVEY
PHPTLEPILSDTYGIIVYQEQIMQIASAMAGFTLGEADLLRRAVSKKKREVLDEQRKFFV
RGSLKQGYSDEEANGVYDLIVRFADYGFCRAHAAAYAVLAFQTAYLKAHYPVAFMASMLT
AVVGNQRKTAEYVDECRRMGIEVLKPDVNESGVLFTPIAAAGESGKGAIRFGLAGVKNVG
TQAIESIMRERGESSFESLSDFCRRVDSRVCNKRVIESLVQAGALESLPGHRSQQLAALE
PTLAAAALWRKEREELQIELFDFEESPNWNVDLPNVPPYTQTQMLELERDLMGLYLSGHP
LDAFDELMDELKLDRLVDISEMADGSTVFTAGMIVSLKPFVTRKGQSMAFLEIEDRIMGT
ELVAFPSVWAKSASFVKKGSLVFVRAKVQLGDEDYKLLADDILPLESANLKLQAERLRRI
GQSSRSGSGPGSGGSYPGRPGATAQGAKGAVPVAAASAAAVKPATPTMIEAPQRVYILID
AAHEQPATLIRLKLLLKTHPGQLVTVLRYEREKRTVALSDEYKVEPTPELVEEMEKLLGE
GSIRVK
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgatttcgttcatctacacgttcatagcgaatacagcctgctcgatggcgcggct
cgcatcaaggagatggcggccaaagcggccgagcttggcatgacatcgcttgcccttacg
gatcacggcgtcatgtacggcgccattcccttctataaagcctgccttgagcacggcatt
aaaccgataatcggcatggaagcctatatcacggccggttccaggcacgacaagcaatcg
cgcaaggaacagccgacttatcatcttacgttgctcgccaagaacgagaccggttaccgg
aacttgatgaaactaacttcgatcgggcatttggaaggcttctattatcgtccgcgcatc
gacttcgaggcgttatctgcccacgccgaaggcctcgtctgtctcagcggctgcatgagc
agcgaattgtcgcgccaactgatggacgacaacgaggaggcggccaaggcgacggcgatg
aggtaccgggacttgttcggcgaagattattacttggaaattcaagatcacggcattctg
gaccagaagaaaataacggccggagtcctaaagctgtccgaggagttgggaattccgcta
gccgcaacgaacgattcgcactacatctgcgaagaggataactccctgcaggacgtgctg
atgtgcattggaaccggcaagacggtcgacgatccggatcgttttaagatttcgacgaac
cagttattcctcaaaagcggggaagaaatggcggcgttgttccgacatgttcccgaagcg
atcgccaatacggtgaagatcgccgatagctgctcgcttgagcttgagttcggcaaacac
gttttgccggcgtttaacccgttgccggaagggagctcggctgcgaggtatttggaagag
ctgtgcatggcaggcttgcgggagcgcttcgaagggctgccggagtgggaggacgccgag
taccgctcggcggcggaggagcgccttcgctacgagctgcgcgtcatcggcgagatgggg
ttcgacgattactttctgatcgtgtgggattttattcgctatgcgcacgagcacggcatc
gtgacgggacctgggcgcggttcctcggcgggaagcttggttgcgtacgtattgaaaatc
acagacgtcgatccgctcaaacataagctcttgttcgagcggttcctaaatcccgaacgg
gtcagcatgccggatatcgatatcgacttcagcgacgaacggcgcgacgaagttatccgc
tacgtcgtggagaagtacggcgccgcacacgtggcgcagatcattactttcggaacgttg
gctgcccgcgcggcggtgcgcgacgttggccgggtgcttaatttgccttacggcgaagtc
gataagaccgcgaagctcatcccgggcatgccggggatgtcgatcgaacgggccatgaag
gagaacgcggagtttcgggcattggcggaaggcggctccggcgccgcggagctgatcgcg
atggcgaagcgggtcgaggggatgccgcgccatgcgtctacccacgcggccggagtcgtc
atttcgtcagatccgcttacggactacgtgccgttgcaggaaggaaccgacggcgttccg
ttgacccagtattcgatggagaacctggaagcggtcggcttgctcaagatggattttctc
ggtttgcgtactttgtccatcatcgaacggtcgcttgtctccatccgggaacaaaccgga
agggaattgcggtgggaggaagtgtcctacgaagataaggacacttacgagctgatggga
cgcggggagacgacggggattttccagctcgaatcctcgggaatgcgccgggtgctcaaa
gagatgaagccttcctcgttcgaagacgtcgtttcggcggttgcgctgtacaggcccggg
ccgatggagtttattccgcaattcattcgggcgaagcacggcttaatcgaggtggagtat
cctcatccgactctcgaaccgattttatccgatacgtacgggattatcgtctatcaggag
cagattatgcagatcgcttctgcgatggccggatttacgctgggcgaagcggatttgctg
cgtcgcgcggtgagcaagaagaagcgggaagtgcttgacgagcaacggaagttttttgtc
cgggggagcttgaagcaaggctattctgatgaagaggcgaacggcgtatacgacctgatc
gttcgcttcgccgactacggcttctgccgtgcgcatgccgccgcatatgcggtgttggct
ttccagacggcttatttgaaggcgcattatccggtcgcgttcatggcttccatgttgacg
gcggtcgtaggcaaccagcgcaagacggcggaatacgtagacgaatgccgcaggatgggc
atcgaggtgttgaagccggacgtgaacgagagcggcgtgttgtttactccgatcgcggct
gcgggcgagtcgggcaagggagcgatccgtttcgggcttgcgggggtgaagaacgtcggc
acgcaagcgatcgagagcatcatgagggaacggggggagagctctttcgagagcttaagc
gacttctgcaggcgcgtggattcgcgcgtgtgcaacaagcgggtcatcgagtcgctcgtg
caggcgggcgctctcgaatcgttgccgggccatcgttcgcagcaattggcagcgttggag
cctacgctcgcggcggcggcgttatggcgcaaggaacgggaagagctgcagatcgagctg
ttcgacttcgaggagtccccgaattggaatgtcgatcttcccaacgttccgccttatacc
cagacgcaaatgctggagctggaaagagatttgatggggctatacttatccgggcatccg
ttggatgcgttcgatgaactgatggacgagctgaagctcgacaggttggtggatatctcg
gaaatggcggacggatcgaccgtgtttaccgcgggcatgatcgtatcgcttaagcctttc
gtaacgcgcaaagggcaatcgatggcgtttttggaaatcgaggatcggatcatggggacg
gagcttgtcgctttccctagcgtgtgggcgaagtcggcttcattcgtcaagaaaggctcg
ttggtattcgttcgcgctaaggttcagctaggcgatgaggattacaagctgctcgcggac
gatatattgccgcttgaaagcgcgaatctgaagctgcaggcggaacggcttcgccgcatt
ggccagtcgtcgcgttcgggctcgggtccgggctcgggcggaagttatccgggtcgaccg
ggggcgactgcgcaaggcgcgaaaggtgcagtgcctgtggcagccgcgagtgccgctgcc
gtcaagcccgcaactccgacgatgatcgaagctccgcaaagagtgtacattctaatagat
gccgctcacgaacagccggcgacgcttattcggcttaagctgctgcttaaaacgcacccg
ggccaactagtgaccgttcttcgctacgagagggaaaagcgaaccgtagcgctgagcgac
gaatataaagtcgagccgactccggagctggtcgaggaaatggagaagctgctcggcgag
ggaagcataagggtgaagtga
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integrated database retrieval system
