Cohnella cholangitidis: FPL14_10410
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Entry
FPL14_10410 CDS
T07708
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPL14_10410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchl03021
]
FPL14_10410
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_10410
Enzymes [BR:
cchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPL14_10410
Transcription machinery [BR:
cchl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPL14_10410
DNA repair and recombination proteins [BR:
cchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPL14_10410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QMV41548
UniProt:
A0A7G5BX64
LinkDB
All DBs
Position
complement(2194381..2195325)
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AA seq
314 aa
AA seq
DB search
MIVIEKPKIDSVEIQDDKRYGRFVVEPLERGYGMTLGNSLRRILLSSLPGAAVVSVQIDG
VLHEFSTIPGVIEDVTQIILNLKRLSLKIHSDEEKVLEIDAEGDGVVTAGDIRADSDVEI
LNPDLHIATLASGARLHMRIFARVGRGYVPSDRNKKEDQPIGVIPIDSIYTPITRVNYQV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTDHLSLFVGLTDEAKDTETMKEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRFEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgatcgagaaaccgaaaatcgattccgtggaaattcaggatgacaagaggtat
ggccggttcgtcgtagaaccgctggaacgcggttatgggatgactcttggtaactctctt
cgtcgtattctgttgtcgtccttaccgggcgcggccgttgtatcggttcagatcgacgga
gttcttcatgaattctccacgattccgggtgttattgaggatgtaacgcaaatcatcctc
aatctgaagcgtctttcgctgaagattcattccgatgaggaaaaagtgcttgagatcgat
gcggaaggcgatggcgtagttacggctggagatattcgcgcggatagcgacgtggaaatc
ttgaacccggacctgcacatcgctacactggcttctggcgcacgtcttcacatgcgtata
tttgccagagtaggacgcggttacgtcccttcggatcgtaacaagaaggaagatcaaccg
attggcgttattccgatcgattcgatctatacgccgattacccgcgtgaactatcaagtc
gagaacactcgcgtcggtcaagtaacgaactatgacaagcttacgcttgaagtttggacc
gatggcagtatccgacctgaagaagcggttagcctgggcgcgaaaatcctgacggatcac
ttatccttgttcgtgggtcttacggatgaggccaaagataccgaaacgatgaaagagaag
gaagaggacaagaaggaaaaagtgctcgagatgactatcgaagagctcgacctttcggtc
cgttcctacaactgcttgaaacgcgctggaattaacaccgttcaagagctgatcacgaaa
acggaagaagacatgatgaaggttcgcaacttgggccgcaagtctttggaagaagttcaa
gaaaagcttgaagaactgggattaggtctccgtttcgaggaatag
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