Cohnella cholangitidis: FPL14_10595
Help
Entry
FPL14_10595 CDS
T07708
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cchl
Cohnella cholangitidis
Pathway
cchl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cchl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPL14_10595 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchl03021
]
FPL14_10595 (rpoC)
03400 DNA repair and recombination proteins [BR:
cchl03400
]
FPL14_10595 (rpoC)
Enzymes [BR:
cchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPL14_10595 (rpoC)
Transcription machinery [BR:
cchl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FPL14_10595 (rpoC)
DNA repair and recombination proteins [BR:
cchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FPL14_10595 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
SLH
Motif
Other DBs
NCBI-ProteinID:
QMV41582
UniProt:
A0A7G5BX98
LinkDB
All DBs
Position
complement(2216878..2220501)
Genome browser
AA seq
1207 aa
AA seq
DB search
MLDVNNFEFMKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGDTPLEKKQLLSEKEYRSYRDKYGYAFHAGMGAEAVKRLLQ
DIDLDRELEMLKEDLRTAQGQRRNRAIKRLEVVESFRNSGNLPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLRMYQCGLPKE
MALELFKPFVMKELVLKGLAHNIKSAKRKVERVSPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAGNIL
NPKDGKPVVTPSQDMVLGCFYLTMDNNKSYGTGLRFANVNEAVSAYQRSTAGISLHARVI
IPVKELKKKTFTPEQQEALIVTTIGKIIFNEIFPDTFPYINEATKENLVKGTPDKYFIYE
KGADLSKYIEDPQIPGAVGKEYLGNIIGECFRIYHTTETSVILDKIKQLGFTYSTRAGIT
IGVSDVIVPQEKQQILAKSEERVNVVATQYRRGLITNEERRDRVIEIWSKTKDELTDILM
KSMDRYNSIMLMVDSKARGNKSQITQLGGMRGLMANPSGRIIELPIKSNFREGLTVLEYF
ISTHGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGITVSRIEDGKEVIE
DLFDRIEGRYAFETIRHPETKEIIANRNDLIDTPIAEEIIRADIKKVQIRSVLSCRARHG
VCKLCYGRNLATGKKVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQ
ELFEARNPKGQAIISELDGVVKEIRETKDRREIELQGGAESKIYPVSYGSRIRVVQGQQV
EAGDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHIEVMIKQMLRKI
RIVDPGDTVLLPGAFVDLHEYEAANRDAILADKEPAVARPVLLGITKASLETDSFLSAAS
FQETTRVLTDAAIKGKVDRLLGLKENVIIGKLIPAGTGMARYRNIRVVSPFDEPTDEAAE
LEPVGVE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgttagacgtcaataactttgagtttatgaaaatcggtttggcttccccggacaaaatc
cggtcttggtcaagaggcgaagtcaagaagccggaaacgataaactaccggaccttgaag
ccggaaaaagaaggcctgttctgcgagaagattttcgggccgaccaaggactgggaatgt
cattgcggcaaatacaaaagagttcgttacaaaggcgttgtctgcgatcgttgcggagtc
gaagttacgcgcgcgaaagttcgccgcgaacggatgggccacatcgaattagcggcgccc
gtatcgcacatctggtatttcaaagggattccaagccgcatgggtcttgcgctggatatg
tctcctcgttcgctcgaagagatcatctacttcgcttcctacgtcgttacggatccgggc
gacacgccgctggagaagaaacagcttctctccgagaaggaataccgcagctaccgtgat
aaatacggatacgcgttccatgccgggatgggtgccgaagcggtcaagagactgcttcag
gacatcgacctggaccgcgagctcgaaatgctgaaagaagacttgcgcaccgctcaaggc
caacgtcgcaatcgcgcgatcaaacgccttgaagtggtggaatcgttccgtaactccggc
aacttgccggattggatgattctcgacgttctgccggttattcctccggaattgcgccca
atggttcaattggacggcggacgtttcgcgacaagcgatttgaacgatctgtaccgtcgc
gttatcaaccggaacaaccggttgaaacgtttgctcgatctgggagcgccggatatcatc
gtgcagaacgagaagcggatgcttcaagaagccgtcgatgccctgatcgacaacggccgt
cgcggccgtccggttaccggcccaggtaatcgtccgttgaaatccctcagccacatgctg
aaagggaaacaaggacgtttccgtcagaacttgctcggtaaacgcgtcgattactccgga
cgttcggttatcgttgtcggaccaagcctgagaatgtaccaatgcggtcttcctaaagag
atggcgttggagctgttcaagccgttcgttatgaaagagcttgtgcttaaaggccttgct
cataacattaagagcgcgaagcgcaaagtcgaacgcgtgagccctgaagtatgggatgta
ctcgaagaagtaatcaaggaacatccggtactgctcaaccgtgcgccaacgcttcacaga
ctgggtatccaagcgttcgaaccgatcttggtcgaaggccgcgctatcaagcttcacccg
ctcgtttgtacggcttataatgccgacttcgacggcgaccaaatggcggttcacgtaccg
ttgtccgcggaagcgcaagccgaagcacgcttgctcatgcttgcggcgggtaacatcttg
aaccctaaagacggtaagccggtagttactccgtcccaggatatggttcttggatgcttc
tatctcacgatggacaacaacaaatcctacggaacgggtcttcgcttcgcgaacgtgaac
gaggctgtctccgcataccaacgcagcactgcaggcatttccctgcacgctcgggttatc
attccggttaaagagttgaagaaaaagacctttactccggagcaacaagaagctctgatc
gttacgacgatcggaaaaattattttcaatgaaatcttcccggatacgttcccatacatt
aacgaggcgacgaaagaaaacctcgttaaaggtacgccggataaatatttcatctacgaa
aaaggcgccgacctgagcaaatatatcgaggatccgcaaattccgggagccgtaggtaaa
gaatacttgggtaacatcatcggcgaatgcttccgtatctaccacacgacggaaacatcg
gttattttggataaaatcaagcagctcggattcacgtactcgacgcgcgccggaattacg
atcggcgtatccgacgttatcgttcctcaagagaagcaacaaattctcgcgaagtccgaa
gagcgcgttaacgtcgtagctacgcaataccgtcgcggtttgatcacgaacgaagagcgc
cgcgatcgcgttatcgagatctggagcaaaacgaaggacgaattgaccgacattctgatg
aagtccatggatcgctacaacagcatcatgttgatggtcgactccaaagcgcggggtaac
aaatcgcaaatcacccaattgggcggtatgcgcggtctgatggccaacccgtccggacgt
atcatcgagttaccgatcaaatcgaacttccgcgaaggcctcaccgtattggaatacttc
atttccacgcatggagcgcggaaaggtcttgccgatacggcgctaaggacagccgactcc
ggttacttgactcgtcgtctcgtagacgtagcccaagacgtaatcgttcgcgaggacgat
tgcggaacggataaagggattacggtatcccgtatcgaggatggcaaagaggttatcgag
gacttgttcgaccgtatcgaaggccgttacgcgttcgaaacgatccgccatccggagacg
aaagaaattatcgccaatcgcaacgatctgatcgacacgcctatcgcggaagagatcatt
cgtgccgacattaagaaagtacagattcgttccgtgcttagctgccgtgcccgtcatggc
gtatgtaagctgtgttacggacgcaatctggcaacgggcaagaaagtcgaaatcggggaa
gcggtcggtattatcgccgcgcaatcgatcggggaaccgggaactcagctcacgatgcgt
acgttccataccggcggtgttgccggagacgatattacgcaaggtttgccgaggatccaa
gagctgttcgaagctcggaatccgaaaggtcaagccattatctccgagcttgacggcgta
gttaaagaaattcgcgaaacgaaggatcgccgcgaaatcgagttgcagggcggagcggaa
tccaaaatctacccggtcagctacggttcccgtattcgcgtcgttcaaggccaacaggtc
gaagcaggcgacgaattgaccgacggttcgatcgatccgaaagaaatgctgaggattaaa
ggaattcgcggggtgcagaactacattctgcaagaggttcaacgcgtttaccgtaaccaa
ggcgttgaaatcaacgataagcacatcgaagttatgatcaagcagatgcttcgcaaaatt
cgcatcgttgatccgggcgacacggttctgctccctggcgcattcgtggatctgcacgaa
tacgaagcggctaaccgcgacgcaatccttgccgataaagagcccgcagtagcgcgtcca
gtgctcctcgggatcacgaaggcttcgctcgaaaccgattccttcttatcggcggcgtct
ttccaagagacgactcgcgttctgaccgatgctgctatcaaaggcaaagtcgacagattg
ctcggactcaaggagaacgtcattatcgggaagctcattccggctggtacgggtatggct
cgttaccgcaacattcgcgtcgtgtcgccttttgacgaaccgacggacgaagcggcagag
ctcgagccggttggcgttgagtaa
DBGET
integrated database retrieval system
