Corynebacterium choanae: CCHOA_00935
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Entry
CCHOA_00935 CDS
T06925
Symbol
smc1
Name
(GenBank) Chromosome partition protein Smc
KO
K01421
putative membrane protein
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
CCHOA_00935 (smc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC2_membrane
DUF3533
NET2A
BLOC1_2
DUF3450
Spike_torovirin
ZapB
DUF489
Sec10_HB
DAHL
MscS_porin
FBF1
Apolipoprotein
HAUS-augmin3
ATG17_like
PspA_IM30
WXG100
Motif
Other DBs
NCBI-ProteinID:
AZA12615
UniProt:
A0A3G6J3H3
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Position
complement(234168..236231)
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AA seq
687 aa
AA seq
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MFAGFSLGTELRRFRRSTLGRIAILAITLIPLMYSALYLWAFWDPFGQVNRLPIAFVNND
KGTVVAGEPFNAGDEVVAELKEEPQVSFDFVDEHTAQEGVKDGTYYFVVSLPEDFSQAVT
SPTTDSPHKAVIHTTYNDTNGYLSTLIGQNVMRTMVPVISNKIGIQAVDKVLVGVQDAGQ
GLHQAADGAQQLADGGHTLQDGLGSAKDGSDKLATGAQTLDEKMGELSQGAQQLADGTSL
LATKVDTATGKLTDLTRGVNQLGSGLDQLGQGATELNNGVQQLKSTSDQITATQADMARN
LRQIAAQLRAIPDPGAHNLAAQVEQAATNMETTALGPASPLTNQVNRLAGGTSQLAYQLA
DPNAPFRGGFNQLQQGTGQLPGQLGQLVDGVNQLNSGAQTLAAGASQLKSEGTAQLTTGA
NDLDDGIGKLYSGSGELVIGLDELATKLGEGADKVPAMDTEMREHLAQTIGAPVKLETTN
EAGENTFGAGLAPFFFSLAMFIGGLIIFLLLQPMQNRAVASGASPLRAAIDGFLPGALIG
TLQATIIVAVTLYGVGLNAAYPLGLWCFSVLVSVMFVAVNQFLNVLLGPGPGKVAAMALL
MLQILASGGLYPVETEPALFQWLHPINPMTYSVDGFRQFIYGNLDHRAPQSITAVLIIIA
LSLTLTAFGAWRDRTWTMKRLHPPIKL
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaggattttccctcggcaccgaactccgccgcttccgccgctccacgttgggg
cgcatcgctatcctcgcgatcacccttattcccctgatgtactctgccctctacctgtgg
gcattttgggatcccttcggacaggtgaaccggctgccgatcgcgttcgtcaacaacgat
aaaggcactgtcgtcgccggggaaccgtttaacgccggcgacgaagtcgtcgccgaacta
aaagaggaaccgcaggtcagcttcgactttgtcgatgaacacaccgcgcaagaaggcgtg
aaagacggcacctactactttgtggtgtcgctgccggaagacttctcccaagcggtgacc
tccccgactactgacagccctcacaaggcggtgattcacaccacctacaacgacaccaac
ggctacctgtccaccctcatcggacagaacgtgatgcgcaccatggtgccggtgatctcc
aacaagatcggcattcaagccgtcgataaagtcctcgtcggggtgcaagacgccggccaa
ggactgcaccaggccgccgacggtgcgcaacagctcgccgacggtggacacaccctgcaa
gacgggctcggcagcgcgaaagatggctccgacaaactcgccacgggcgcccaaaccctc
gacgaaaaaatgggggaactttctcaaggcgcacaacagttagctgacggcaccagcctg
ctggccaccaaagtcgataccgccaccggcaaactcaccgacttaacccgcggagtcaac
cagctcggcagtggccttgaccagctaggacagggtgccaccgagttgaacaacggggtt
cagcagctgaagtccaccagtgatcaaatcaccgccacgcaagcggatatggcccgaaac
ctgcggcaaatcgccgcccagctgcgcgctatccccgacccgggggcacacaatctggct
gcccaagttgagcaggccgccaccaatatggaaaccaccgcattaggacctgcttccccg
ctcacaaaccaggtgaatcggcttgctggcggtaccagccaactggcgtatcaactcgcc
gacccgaacgcccccttccgcggcgggtttaaccagcttcagcaaggaactggtcaactg
cccggccagcttgggcaacttgtcgacggcgtcaatcagctcaacagtggcgcccaaacg
cttgctgccggtgctagccagttaaagagcgaaggcaccgcccagttaaccaccggcgcc
aacgatctcgacgacggcatcggcaaactatattccggatctggggagctggttatcggc
ctcgacgagctggctacgaaactcggtgaaggtgccgacaaggtgcccgccatggacact
gagatgcgcgaacatctcgcccaaaccatcggtgcaccagtgaaactcgaaactaccaac
gaggccggggagaacaccttcggcgccggtcttgccccgttcttcttctccttggcaatg
tttatcggcggactgatcatcttcctgctgctgcaacccatgcaaaaccgggcagttgcc
agcggggcaagcccgctgcgtgccgccattgacggattcctgcctggtgcgctgatcggc
accctgcaggcgaccatcattgttgcagtcaccctctacggggtcgggctcaatgccgcc
taccccctaggattgtggtgcttctctgtgctggtcagtgtgatgtttgtggctgtcaac
cagttcctcaacgtcctgcttggcccaggacctggcaaggtggctgcaatggcactgctc
atgttgcagattctcgcctctggcggcctctaccccgtagagaccgaaccagcgctgttc
cagtggctccatccgatcaatccgatgacctattcggtcgatggcttccgccaattcatc
tacggcaatctcgaccatcgcgccccgcagtcgatcaccgcagtactgatcatcatcgcc
ctgtcgctcacgctcaccgcttttggtgcgtggcgtgaccgcacctggacgatgaaacgg
ctccatccgccaatcaagctctaa
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