Corynebacterium choanae: CCHOA_01200
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Entry
CCHOA_01200 CDS
T06925
Symbol
bca1
Name
(GenBank) C protein alpha-antigen precursor
Organism
ccho
Corynebacterium choanae
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Ortholog
Paralog
GFIT
Motif
Pfam:
Rib
RibLong
He_PIG
Big_4
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
AZA12668
UniProt:
A0A3G6J6W4
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Position
complement(306970..312801)
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AA seq
1943 aa
AA seq
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MNISCNRIAGKRALVALTTAFATSTATLLPLPVQPLAAAVIGGSYVSVPDGAEKEAIYSP
GVTDQPKTVNGRVYINRDRNNAISNDKPIELGIPGIPVYAYYESEGFRSPIFYTVTDATG
YYSIAMPDFVGADGKTHDFIAAIGERLKVWADLSGSPYRLADNDALGKMQTFGTNRETGS
WIAGSARDFHIAVQEIPVSSLHKPEDQWYDGGLGDRKDNYDSNLTSPYGRLQGTVFWNLN
EPSGDPYHYSVGIPRKTAGDLPASGVKVIASYLNDTGKEVMDAWKKAHPDFTKDELAAQS
RALVAEHPEYIAETIYTTTNASGDFSMNFKGIFNDRKDVVDEQMTIGNKTDGKLNGFGWR
TLIKEFKHINRDYLYIQTDTPPEIGEYSDFNFAGYFDPGTVTRPPDKDQLWLSVTNSLGN
IKMALSRGATNFDVTDYDAITNIAPPGVTVQTTASGFPPITDTTYTIKWYQQTVQDDGTL
GEKTEVPGATCATITPQPDSSIPSCPVTVPKQFEGRVLYTAQLYSSQDPNDIIALDSFMA
ASYATDLPSRAIDADTPYAGSVNLPVPDGTTVTYALQPGTSLPRGLELDPATGAITGAPT
IPGDYEFKIEATATKDGRSTITHIPGSITIVDTAASRDKDAPFPTDATTEHAVVGNDYSA
PLVVTPEMGDRVRNFAINGNPPAGMTLSPEGVLAGTPTQPGEQPFSVTYEVQDRSGKWSK
VTDTVPFAVVSTDTTKPVVTPTQVSTTAGEAIPMDAPITLATISDDQAAPLAKNNVQVSD
NLPNGLSWDVQDGKIILTGTPTTPTDGPVNVTVTVTDDAGNKTEVTVPVTITQTDAAKYD
ASYPTSVSGKQGTTITTTPQITKTGETEATTDNPVKSYALGELPQGVTQEQVSINPATGE
ITFTPTANQEAKQYDFPVTVTYNDDTTDTTTASTTVTLSDANTYTPTGGTITVPQQSTPG
ATEAKQAITNAADLPADTKFEFVDTIDTSTPGAKQATVKVTYPDGTSETVPVTVKVADDA
TTFTPNPGTVTVGQNSEPGADEAKKAITNAADLPADTTFEFVGTVDTSTPGDKQATVKVT
YPDGTSEEVQVTVKVTDEPQNTTYDVSYPAAVSGKQGTTITTTPQTTKTGETTATTDNPV
KSYALGKLPQGVTQEQVSINPATGEITFTPTANQEAKQYDFPVTVTYNDDTTDTTTASTT
VTLSDANTYTPTGGTITVPQQSTPGATEAKKAISNADQLPANTTFEFVGTIDTSTPGDKQ
ATVKVTYPDGTSETVPVTVKVADDATTFTPNPGTVTVGQNSEPGADEAKKAITNAADLPA
DTKFEFVGDIDTSTPGDKTATVKVTYPDGTSEEVQVTIKVAEDSSTTDAETYDPAAGTVT
VGQQSTPGADEAKKAITNAADLPADTKFEFVGDIDTSTPGDKTATVKVTYPDGTSEEVQV
TIKVAEDSSTTDAETYDPAAGTVTVGQQSTPGADEAKKAISNADQLPADTTFEFVGDIDT
STPGDKTATVKVTYPDGTSEEVQVTIKVAEDSSTTDAETYDPAAGTVTVGQQSTPGADEA
KKAITNAADLPADTKFEFVGTIDTSTPGDKTATVKVTYPDGTSEEVQVTIKVAEDSSTTD
AETYDPAAGTVTVGQQSTPGADEAKKAISNADQLPADTTFEFVGDIDTSTPGDKTATVKV
TYPDGTSENIDVTIIVEGVNSDYALSYPDSKVSAGQKIRVEPKFVDATTGAPMVLPEHSQ
MSINTSTLPTGISATVNPNTGQIEVKVSQDYVFTGTGSADIVKLPATLTLEDGQQLQASL
TVSVERFTPPANPGDTDNEGQITPPSENTSSIENDALKSIIPVVLGLGALAGILGVIGSI
PALLPNTHLPLDVPSPSEVPTDLGATDGNAPQSDVVQSPNRDVTNGQLLATTGADVDRTV
LGGLLAMVVGSLLAFFRRRRQEP
NT seq
5832 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctcatgcaatcgcatcgccggaaaacgcgccttggtagcgctcaccacagca
tttgccacctctactgcaacattactgccactgccagtgcaacccctcgccgcagcagtc
atcggcggatcctatgtctctgtgccggatggcgcggaaaaagaagcgatttactccccc
ggtgtcaccgaccaacccaagaccgtcaatgggcgggtctatatcaaccgtgaccggaac
aatgccatcagcaacgacaaaccgatcgaactcggtattccgggaattccggtgtatgcc
tactacgagtcggaaggcttccgctcgccgatcttctacactgtcaccgacgcaaccggc
tactactcgattgcgatgccagactttgtcggcgccgacggcaaaacccacgactttatc
gccgccatcggggaacgcttaaaagtctgggctgacctttccggctccccgtaccggctg
gcagacaacgatgccttagggaaaatgcaaaccttcggcaccaaccgtgaaactggttcc
tggattgccggctcagcccgggacttccacattgctgtgcaagaaatcccggtgtcgagc
ctgcacaagccggaagaccagtggtacgacggtggacttggtgaccggaaagacaactac
gactcaaatctcacctctccatatggccgcctgcaaggcaccgtcttttggaacctcaac
gaaccatccggtgacccgtaccactattcggtcggtatcccccggaaaaccgcgggggat
ttgcctgctagcggggtgaaagtcattgcctcctatctcaacgacacaggcaaagaagtc
atggatgcatggaagaaagcccatccagacttcaccaaagacgagctcgctgcacaaagc
cgcgcactggtggccgagcatccggaatatatcgctgagacgatctacaccaccaccaat
gccagcggcgatttctcaatgaacttcaagggcatcttcaacgaccgaaaagatgttgtc
gatgaacaaatgaccattggtaataaaactgatggcaagctcaatggcttcggctggcga
actctgattaaagagttcaagcacatcaaccgggactatctctacatccaaacagacaca
cccccagagatcggggagtactctgacttcaactttgctggctattttgatccgggcacg
gtcactcgtccgccagacaaagaccagctatggctgtcggtgacgaactcgctcggcaac
attaagatggcactgtcccgcggtgccaccaactttgacgtcaccgactatgacgccatc
accaacatcgcccctcccggggtgacggtgcaaaccaccgcctctgggttcccgccgatt
acagacaccacctacaccatcaagtggtatcagcagaccgtccaggacgacggcacctta
ggggaaaaaacagaagtccccggagcaacctgtgcgacgatcacaccacagcccgactca
tcgatcccttcttgtccggtgaccgtaccgaagcagttcgaaggccgcgtgctgtacaca
gcacagctctacagcagccaagacccgaacgatattatcgccctcgacagctttatggcg
gcgtcctatgccaccgatctgccgtcgcgcgctatcgacgcggacaccccctatgccggt
tctgtgaatctcccagtgccggacggcaccaccgtcacctacgccttgcagccgggcacg
agtctgccccgtggcctggaacttgaccccgcaacaggtgcaatcaccggcgcgccgacc
atcccgggcgactacgagttcaaaatcgaggctaccgccaccaaggatggacgctccact
atcacccatattcctggttcgatcaccatcgtcgacacggcggcatcccgggacaaggat
gccccgttcccgaccgatgcgaccactgaacacgctgttgtcggcaacgattacagtgct
ccactcgtggtcacccctgaaatgggcgaccgggttcgaaactttgccatcaacggcaat
ccacctgctggcatgacgctcagcccggaaggtgtacttgctggcacccccacccaacct
ggtgaacagcctttctctgtcacctatgaggtgcaggatcgctccgggaaatggtcgaaa
gtcactgacacagtgccgtttgcggtcgtctcaaccgacacgacaaaaccagtggtcacc
ccgactcaggtaagcaccaccgccggcgaagctatccctatggatgctccgatcaccttg
gcaaccatcagcgatgaccaagcagccccgctagccaagaacaatgtgcaggtcagtgac
aatcttcccaatggtctttcctgggatgtacaagacggcaagatcatcttgaccggcacc
ccaacgaccccaactgatggaccggtgaacgtcacggttaccgtcaccgatgatgctggg
aataaaactgaagtcaccgtcccggtcaccattacccaaactgatgcggcgaagtacgac
gcaagctatccgacatctgtctccgggaaacaaggcaccaccatcaccaccaccccgcaa
atcaccaaaaccggggaaaccgaagccaccaccgacaacccggtgaaaagctacgcactc
ggtgaactcccacaaggagtcacccaggaacaggtgtcaatcaacccggcaaccggtgaa
atcaccttcacccccaccgccaaccaggaagccaaacaatacgacttcccagtcaccgtc
acctacaacgatgacaccaccgacaccaccaccgcctccaccaccgtcaccctcagcgac
gcgaacacctacaccccaaccggtggcaccatcaccgtcccgcaacagagcacacccggc
gcaaccgaggcaaaacaagccatcaccaacgccgccgatctgccagcggacaccaaattc
gagttcgttgacaccatcgacacgtccacccctggtgccaaacaagcaacggtgaaggtc
acctacccggacggcaccagcgagactgttcctgtaactgtcaaggtcgctgacgacgca
accacgttcacacccaacccagggaccgtgaccgtcggccagaactccgaaccaggtgcc
gacgaggcgaaaaaggcaatcaccaacgccgccgatctgcctgcagacaccaccttcgag
ttcgtcggtaccgtcgacacgtccacccctggtgacaaacaagcaacggtgaaggtcacc
tacccagacggcaccagcgaggaagtccaggtgaccgtcaaggtcacagacgaaccacaa
aacaccacctacgacgtgtcctatcctgcggctgtctccgggaaacaaggcaccaccatc
accaccaccccgcagaccaccaaaaccggggaaaccacagccaccaccgacaacccggtg
aaaagctacgcactcggtaaactcccacaaggagtcacccaggaacaggtgtcaatcaac
ccggcaaccggtgaaatcaccttcacccccaccgccaaccaggaagccaaacaatacgac
ttcccagtcaccgtcacctacaacgatgacaccaccgacaccaccaccgcctccaccacc
gtcaccctcagcgacgcgaacacctacaccccaaccggtggcaccatcaccgtcccgcaa
cagagcacacccggcgcaaccgaggcgaaaaaggcaatatccaacgccgatcaactccca
gcgaacaccacattcgagttcgttggcaccatcgacacctctacccctggtgacaaacaa
gcaacggtgaaggtcacctacccggacggcaccagcgagactgttcctgtaactgtcaag
gtcgctgacgacgcaaccacgttcacacccaacccagggaccgtgaccgtcggccagaac
tccgaaccaggtgccgacgaggcgaaaaaggcaatcaccaacgccgccgatctgcctgca
gacaccaaattcgagttcgtaggcgacatcgacacctccacccctggtgacaagaccgca
accgtgaaggtcacctacccggacggcaccagcgaagaagtccaggtgaccatcaaggtc
gcggaagattcgtctaccaccgacgcggaaacctacgaccctgcagccggaacggtgacc
gtcggacaacaaagcaccccaggtgccgacgaggcgaaaaaggcaatcaccaacgccgcc
gatctgccagcggacaccaaattcgagttcgtaggcgacatcgacacctccacccctggt
gacaagaccgcaaccgtgaaggtcacctacccggacggcaccagcgaagaagtccaggtg
accatcaaggtcgcggaagattcgtctaccaccgacgcggaaacctacgaccctgcagcc
ggaacggtgaccgtcggacaacaaagcaccccaggtgccgacgaggcgaaaaaggcaata
tccaacgccgatcaactcccagcagacaccaccttcgagttcgtaggcgacatcgatacc
tccacccctggtgacaagaccgcaaccgtgaaggtcacctacccggacggcaccagcgaa
gaagtccaggtgaccatcaaggtcgcggaagattcgtctaccaccgacgcggaaacctac
gaccctgcagccggaacggtgaccgtcggacaacaaagcaccccaggtgccgacgaggcg
aaaaaggcaatcaccaacgccgccgatctgccagcggacaccaaattcgagttcgtcggt
accatcgacacgtccacccctggtgacaagaccgcaaccgtgaaggtcacctacccggac
ggcaccagcgaagaagtccaggtgaccatcaaggtcgcggaagattcgtctaccaccgac
gcggaaacctacgaccctgcagccggaacggtgaccgtcggacaacaaagcaccccaggt
gccgacgaggcgaaaaaggcaatatccaacgccgatcaactcccagcagacaccaccttc
gagttcgtaggcgacatcgacacgtccacccctggtgacaagaccgcaaccgtgaaggtc
acctaccccgacggcaccagcgaaaacatcgacgtcacgattatcgtggagggggtcaac
agcgactacgccctttcttatccggacagtaaggtttccgctggtcagaagattcgtgtc
gagccgaagttcgttgatgcaacaaccggagcgccaatggtgctgcctgaacactcccag
atgtcgatcaatacctcgacacttccaactggcatttccgccacggtgaatccaaacacc
ggtcaaattgaggtcaaagtttcccaagactatgtcttcaccggcaccgggtcggccgat
attgtgaagctgccggccaccttgacgttggaagatggccagcaattgcaggcatcctta
actgtttccgtggaacgtttcacgcctcctgcaaaccctggtgacaccgataacgagggg
cagatcacgccaccgagtgagaacacctccagtatcgaaaacgatgcgctcaagtcgatc
attccggtcgtgcttggtcttggtgcactcgccgggattctcggggttattggcagtatt
cctgcgctgctgccgaacacgcatctgccactcgatgtgccttcaccaagtgaagttccc
acagaccttggcgcaacggatggaaatgctccgcagtctgatgtggtgcagtccccgaat
cgcgatgtgacaaacggccaacttttggcaaccaccggtgccgatgttgatcgcaccgta
cttggtgggcttctcgcaatggtcgtcggcagcctcttggcgttcttccgtcgccgccgt
caggagccgtaa
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