Corynebacterium choanae: CCHOA_02610
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Entry
CCHOA_02610 CDS
T06925
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03420
Nucleotide excision repair
ccho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCHOA_02610 (uvrD1)
03430 Mismatch repair
CCHOA_02610 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_02610 (uvrD1)
Enzymes [BR:
ccho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCHOA_02610 (uvrD1)
DNA repair and recombination proteins [BR:
ccho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCHOA_02610 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
CCHOA_02610 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZA12939
UniProt:
A0A3G6J4R2
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All DBs
Position
657433..661233
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AA seq
1266 aa
AA seq
DB search
MSNKPVPLTTPDIAATPQETATMNQPQESPQPVITPEQLAALLGQQYPPTSQQAAIIGAD
TGPLLVVAGAGAGKTETMAARVVWLVANGIVHPDEVLGLTFTKKAAQQLSRRIRQRLARL
QIAPGLRTIDPAGKIAKALAASAPEVSTYDAFAGNIVGEFGLLAAIEPARRLITDTEQVM
IARQVVQDFTGELTQSVKAATLADTVRQLANGLDSHLISEAKLTEETRALIDLIEQAPRA
PRQREALNKTLQEIIDRQQQRLELLPLVQRYRQRLDDLDVTTFSQQLAQAAHLAATYPRI
GEQLRRRYRVIMLDEYQDTSHAQRVLLRSLFGTGDNSLTVTAVGDPMQAIYGWRGATASN
LANFVYDFPSSNSDGTTCPAPKAELTVSWRNPNTVLDCANLVSNEILGSPTNPARPVQPL
TPRPDAPAGDVDIRLLADAEGEEQAIVSWVASRYQQALDEGHADEFSCAILVRTNKAAPP
LATALAAHNIPCEIAGLAGLLFVPEVADVVAFATMLVDPGMDSATLRILLGPAVEIALED
LTALLQRARNLQGRSRIPGEDTQAGDSLEELADHWLLHAPWRDRTGADQPHIQQLARQLA
AAITQEPAPRAGLADALADLGERDRYTSGGVQRLERMSAMLRQLRAVASRSTIVDTLGEI
IRLTGLRVEIYARNHPGAPGSSGAAHVDQLLAEAARYQEIPGATLRGFLEYLRLAEEAEG
GLRSGEITPAPGRVQIMTAHKAKGLEFAHVVVAQADGNNYPSEYFLTKAHNTWQKTVTEF
PPSLLGEDSPTHHDEALPQLILDPDMNRKEIEQALEEHQLEMKQHLAEEAARLLYVAITR
AEQDLLVTAYRQTKRNRPLGFSTLVDTITSTYPELLRYEAPVAGSDTATSCTDDLHHEAE
SVQRTAAELELFQRWLAAPLLGTPPEPIAGVRDSAAAMGVYPADHLQQRRAGMVQGRAIY
DSLAAACPTASEDPVDAEQSATTAARLVSDPGNAVAAPHAAPEDESLVAGDDAAAQLVNL
WQQEVTALIAEQQRQQQATVELEFPSDVTASDMVAMASNPDAYARRLARPVPFQPNRFAK
RGTALHQWLEERFDGQGMLDFDDLPGTGEFDPQGEELAQLKAAFQHSPWASRQPAFVEEP
FAVVIGDTVVRGRIDAVFHTGDDPTAGWQVVDWKTGRVPTGAKREQVAIQLAVYRVAWAK
LVSEKYGVDIPADSIDAGFYYIGANEFVAPSTLPSEHTLAQLVAHTASRAVAAIAASDAD
AAETLD
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgtccaataagcctgtgccgctgaccacccccgatatcgccgccaccccgcaggagacc
gccaccatgaaccagccgcaggaatcgccgcagccggtgatcacaccggagcaactcgca
gcactacttggccaacagtatccacccacatcccagcaggctgcgattatcggcgcagac
accggtccgttgctcgtcgtagctggggcgggggctgggaaaaccgaaaccatggctgcc
agagttgtgtggcttgtcgccaacggcattgttcatcccgacgaagtcctcgggcttacc
tttacgaaaaaagcagcacagcagctctcccgccgtatccggcaacggctcgcacgtctc
caaatcgccccggggctgcgcaccatcgacccggctggcaagatcgcaaaagccttggca
gccagcgccccggaagtgtccacctatgatgcgttcgccggaaatattgtcggcgaattt
ggactccttgccgccattgaacctgcccggcgacttatcaccgacaccgaacaggtcatg
atcgcccgccaggttgtgcaagacttcaccggagagctcacccagtcggtgaaagccgca
acactggccgacaccgtccgacagctcgccaacggacttgatagtcatctcatcagcgaa
gccaaactcaccgaagaaaccagggcgctgatcgatcttatcgagcaggcgccgcgggca
ccccggcaacgggaagcgttaaacaagacgctgcaagagatcatcgaccggcagcagcaa
cgcctcgaactgttgccgctggtgcaacgctaccggcagcgcctcgacgatttggatgtc
accacgttttcccaacaacttgcccaagcagctcacctggcggcaacctatccgcgtatc
ggcgaacaacttcgccgccgctaccgggtgattatgcttgacgaatatcaagacacctcc
cacgcgcaacgagtactgcttcgcagcctatttggaaccggtgacaacagccttactgtg
accgcagtcggtgacccgatgcaggccatctacggctggcgcggagcaaccgcaagcaac
ctggcgaacttcgtctacgattttcccagcagcaacagcgacggcaccacttgccccgcc
ccgaaagcagaactcaccgtctcctggcgaaacccaaacacagtcttggactgtgcaaac
ctggtcagcaatgaaattttaggcagcccaaccaaccccgcccggccagtacagccgctc
acaccacgacccgacgcccccgccggcgatgtggatattcgtctgctggcagacgccgaa
ggtgaagaacaagccattgtttcctgggtagcatcccgctaccagcaagcattggacgaa
ggccatgccgacgaattttcctgtgccattcttgtccgcaccaacaaagccgccccaccc
cttgccacagcccttgcagctcacaacattccctgcgaaatcgctggcctggcagggctg
ctgtttgttcccgaagtagccgatgtggtggcgtttgccaccatgcttgtagatcccggc
atggacagtgccacactgcgcatcctgctagggcctgccgtcgaaatcgccctagaggat
ctcaccgcactgctgcaacgcgcccggaatctgcagggtcgcagccgcatcccgggcgaa
gatacccaagcaggtgacagcctcgaggagctcgccgaccactggttgttacatgccccg
tggcgtgatcgtacaggcgctgatcaaccccatattcagcagcttgcccgccagcttgct
gccgcgattacacaggagcctgccccgcgcgccgggttagctgatgcgctagccgattta
ggggaacgcgaccgctacaccagtggtggggtgcagcgtttagagcggatgagtgcgatg
ctgcgtcaacttcgtgccgtagcgagccgttccaccattgttgacaccctcggggaaatc
attcgactcaccgggctgcgagtagagatttatgcccgcaaccatccaggcgcaccaggc
tctagcggtgcggcacatgtggatcagctgctagctgaagcagcccgatatcaggaaatt
cctggcgcaaccttacgcggcttcttggaatatttacgtcttgctgaagaagccgaaggt
gggctgcgcagcggtgaaatcacccccgcaccgggtcgcgtccaaatcatgactgcgcac
aaagcaaaagggttggaatttgcgcatgttgtggtggcgcaagccgacgggaataactat
cccagtgaatactttttgactaaggcacacaacacgtggcagaaaaccgtcaccgagttt
ccaccgagcctgctgggggaagacagtccaacacaccacgatgaagcgttaccgcagctg
atactcgatccggacatgaaccggaaagaaatcgagcaagccttagaagagcatcagctg
gaaatgaaacagcatctggcggaggaagcagcccgcttgctgtatgtggcgatcactcgg
gctgaacaggatctgctggttaccgcgtatcggcaaacgaaacgcaataggccgctgggg
ttttccaccctggtcgatacgatcaccagcacctatcccgagttgttgcgctacgaggcg
ccagttgccggaagcgacactgccaccagttgcacggatgatctccaccatgaggccgaa
tcggtgcagcgaactgccgcagagctggagttattccaacgctggcttgccgccccgctg
cttggtacaccacctgaaccgattgcaggagtccgcgacagcgcggcagccatgggggtg
tatccggcggatcatttgcagcagcggcgcgccggcatggtgcaaggccgcgcaatctat
gattccctcgccgcagcatgcccgactgcgtcggaagatccagtcgatgctgagcaatca
gctaccactgctgctcggttggtatctgatcccgggaacgcggtagcagcgccgcatgct
gccccggaggacgaatcactggttgccggcgacgatgcggcagcacagctagtgaacttg
tggcagcaggaggttactgcgctcatcgcagaacagcaacggcaacaacaagccacagtt
gagttggaatttccgtccgatgtcacagcctcagacatggtggcgatggccagcaacccg
gacgcgtatgcccggcggttagcgcgtccggtgccgtttcaaccgaaccggtttgccaaa
cgaggcaccgcattgcatcaatggttggaggaacgcttcgacgggcaaggcatgttagat
ttcgatgatctgcccggtaccggcgagtttgatccacaaggcgaagaactcgcccagtta
aaggctgcgtttcaacacagtccttgggcaagccggcagcccgcgtttgtggaggaacct
tttgccgtggtgatcggtgacacggtggtccgcggccggatcgatgcggtgttccacacc
ggtgatgatcccacggctggatggcaagttgtggattggaaaactggccgggtgccaacc
ggtgccaaacgcgaacaggtggcaatccagctggcggtatatcgggtggcgtgggcaaag
ctggtatcggaaaaatacggggtggatatccctgcagacagcattgatgccggtttctac
tacatcggcgcgaatgagtttgtagcgccgagtacactaccgagtgaacacacactggca
cagctggtggcacatactgcatcgcgtgcagttgctgctatcgcggctagcgatgccgat
gctgctgaaacgttggattag
DBGET
integrated database retrieval system
