Corynebacterium choanae: CCHOA_03020
Help
Entry
CCHOA_03020 CDS
T06925
Name
(GenBank) Type III restriction enzyme, res subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CCHOA_03020
09124 Replication and repair
03420 Nucleotide excision repair
CCHOA_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccho03021
]
CCHOA_03020
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_03020
Enzymes [BR:
ccho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCHOA_03020
Transcription machinery [BR:
ccho03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CCHOA_03020
DNA repair and recombination proteins [BR:
ccho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CCHOA_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZA13017
UniProt:
A0A3G6J4R6
LinkDB
All DBs
Position
complement(760218..762068)
Genome browser
AA seq
616 aa
AA seq
DB search
MNVLHSQLLPPVARAFPFRSQLCTALSIKGTAQGTLGHQKHHRIPNQVHPAVAGKELLPH
TNPQEPVVDPHLAPLIVQPDLTVLLDINAPAAEAARIALSPFAELERAPEYFHTYRITPL
ALWNARAAGHDAEQLVDCLDRYSRFALEADLLRRLVAIMDRYGHLQLEQHPAHGLILTSR
DADVLAQVTADPTITPMLGTRIDEVTCRVHPSERGRLKQALIAIEWPVEDLAGYVDGEAH
PMALDTTTNSWQLRDYQVQACKHFVDGGSGVVVLPCGAGKTMVGAATMAELQATTLILVT
TTVAGRQWRAELLRRTTLTEDEIGEYSGDKKEIRPVTIATYQVITRRTRGEFRALDLFSA
RDWGLIIYDEVHLLPAPIFRLTTDLQSRRRLGLTATLIREDGLESDVFSLIGPKRYEAPW
KAIEAQGYIATADCCEVRVSFFDDEQDIYLNADLRDRYRIAAGAAEKTRALRKLLALHAN
EPTLIIGAYVDQLEELAAELDCPLVDGRTTNKRREQLFAEFRAGTITTLCVSKVANFSID
LPEASVAIQVSGTFGSRQEEAQRLGRILRPKSGNNNTAKFYTIVTEDTVDAQFAANRQRF
LAEQGYSYRYVDIDEL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttttgcacagccagctgttaccgccggtggcacgagcttttccgtttcggtca
caactctgtactgccctcagcatcaaagggacagcacagggcactttggggcaccaaaag
caccatcggatacccaaccaagttcaccctgcagtggccggcaaagagttgttaccgcac
accaacccccaggagcctgtcgtggatccacaccttgcaccgttgattgtccaaccggat
ctcaccgtgctgctggacatcaacgcccccgccgccgaagccgcaagaatcgcgctgagc
ccctttgccgagttggaacgcgcccccgaatatttccacacctaccgaatcaccccactg
gcactgtggaatgcccgcgccgccggccacgacgctgaacagctcgtggactgtctcgac
cgctactcgcgcttcgccctcgaagcagacctgctgcgccgactcgtagcaatcatggac
cgctacggacatttgcagctcgaacaacatcccgcgcatggcctcatcctcaccagtcgc
gacgccgacgtgctcgcacaagtcaccgccgatcccaccattaccccaatgctgggaacc
cgcatcgacgaggtgacctgccgggtgcatcccagcgaacgtggacgcctcaaacaggca
ctgatcgccatcgaatggccagtcgaagacttagccggctatgttgacggcgaagcccac
ccgatggcgttagacaccaccaccaacagctggcagctgcgggactatcaagtgcaagcc
tgtaaacacttcgtcgacggcggttcaggtgtcgtcgttttgccctgcggggcaggaaaa
accatggttggggcagccaccatggccgagctacaagcaaccacactcatcctggtgact
accacggtcgccggccgccaatggcgggcggaactcctgcgacgaaccacccttaccgaa
gacgaaatcggtgaatattccggcgacaaaaaagaaattcgacccgtcactattgcaacc
tatcaagtcattacccggcgaacccggggcgaattccgtgccctcgacctgtttagcgcc
cgcgactgggggctgatcatctacgacgaagtccatctgctgcccgcccccattttccga
ctcaccaccgatctgcagtcccggcgacgcctcggactgactgccacccttattcgggaa
gacggactggaatccgacgtgttttcactcatcggtcccaaacgctatgaagcaccgtgg
aaagctatcgaggcacaaggctatatcgccaccgccgactgctgcgaagtccgggtgagt
ttcttcgacgacgaacaagacatttacctcaacgccgacctccgcgaccgttaccggatc
gccgccggtgccgctgagaaaacccgtgcccttcggaaacttcttgccttgcacgccaat
gaaccaacgctgatcatcggcgcctacgtggaccagctcgaagagctagctgccgaactt
gactgtcccctcgtcgatgggcgcaccacaaacaagcgtcgcgaacaacttttcgccgaa
ttccgggccggtaccatcaccacgctgtgtgtgtcgaaggtggcgaacttttccatcgac
ttgccggaagcaagcgtcgcgatccaagtctcgggaacattcggttcccggcaagaagaa
gcacaacgtctcggccggattttgcgaccaaaaagcgggaacaacaacaccgcaaagttt
tataccattgtcactgaggacaccgtggacgcacagttcgccgcgaatcggcagcgattt
ctcgccgaacagggttacagttaccgatacgtcgacatcgacgagctgtag
DBGET
integrated database retrieval system
