Corynebacterium choanae: CCHOA_03275
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Entry
CCHOA_03275 CDS
T06925
Symbol
uvrD3
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03420
Nucleotide excision repair
ccho03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCHOA_03275 (uvrD3)
03430 Mismatch repair
CCHOA_03275 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_03275 (uvrD3)
Enzymes [BR:
ccho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CCHOA_03275 (uvrD3)
DNA repair and recombination proteins [BR:
ccho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCHOA_03275 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
CCHOA_03275 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
CarD_TRCF_RID
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
AZA13067
UniProt:
A0A3G6J4W3
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All DBs
Position
818945..821590
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AA seq
881 aa
AA seq
DB search
MADYNCAPSPFARRRRDNAEPSRSQSPFAGTTQTTGADPAQLLDHLNPQQQAAVTHIGAP
LLIVAGAGSGKTAVLTRRIAYLLQARGVAPWEILAITFTNKAAAEMRERVEELIGPAAQQ
MWVMTFHSTCVRILRQHASLVPGLNSNFTIYDTDDSKRLVTMIAKDRGVDLKAHTPRALL
SIISNWKNELITPEGAAVAASAQGSNATEQVAAELYADFQQQLRAANAVDFDDLIMCVYT
IFRDHPEVAEYYRRRFRHVLIDEYQDTNHAQYQLVAALVGDESSAGILPSELCVVGDADQ
SIYAFRGATIRNIEEFEQDYPHATTIVLEQNYRSTQTILDAANAVIAQNPGRRDKKLWTA
LGQGERIVGWVADNEHDEARFVAGEIDKLVDRGGRYGDVAVMYRTNNNSRALEEIFIRSG
IPYTVVGGTRFYERKEIRDIIAYLKAVLNPDDTVSLQRIINTPRRGIGDKAQEAIAAYAA
SHQLSFGQALRTAADGGIELLGTRAVKAVWKFVSLLDELREFAATATDDVTGYQDLGGLI
EACCEQSGYRAELAKSNDPQNQTRLENLNELVSVAREFTTEQALLQAYEDMDAANPAVDD
AAAADVFAPDLADDDSVADGMQPHQSVGDAAVIGSELGGADPVAGLDIGTPEPGSLQAFL
ERISLVADADQIPDSAEGQVTLMTLHTAKGLEFPVVFVVGWEDGQFPHSRSLGDPVELAE
ERRLAYVAITRAKQQLYLTRAAARSSWGAPTHNPPSRFLQDIPEELINWRRTGPVRGFGG
AWSDRSAGFYGGQSRGSAGTGLGSDGYGSGRSRNSSTIPQAQKGPALVLTVGDMVNHQKH
GLGKVVEVEQIGALKAAQIDFGNGNKQKIVLMPGMDFLEKL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacaattgcgcaccttccccatttgcccgccgacgccgcgacaatgctgag
ccgtcacggtcacagtcgccgtttgctggaaccacccagacgacaggagctgatcctgcc
cagttacttgaccatctcaatccgcagcagcaggctgctgtcacccacatcggggcacca
ctgctgattgtggctggcgccggttccgggaaaactgctgtgcttacccggcggattgca
tatctgctgcaggcacgcggtgtggcaccgtgggaaattttagcgatcaccttcaccaat
aaagccgccgccgagatgcgggaacgcgtcgaagaattgattggccctgccgcccagcag
atgtgggtaatgacgtttcactcgacctgtgtacggattttgcggcagcatgcgtcgctg
gttcccgggttgaactcgaacttcacgatctatgacactgatgattcgaagcggctggtg
actatgatcgcgaaagatcgcggggtcgatctgaaagcgcacacgccgcgagccctgttg
agcattatcagtaactggaaaaatgagctcatcaccccggagggtgcagctgttgcggcc
agtgcccaaggcagcaatgcgacagagcaggtcgccgcagaattgtatgcggattttcag
cagcagcttcgggcggctaatgctgtcgactttgatgatctcatcatgtgtgtgtacacc
atttttcgggatcatccggaagttgcggaatattacaggcgccgattccgccatgtgtta
attgacgaataccaagacacgaaccatgcccaatatcagcttgttgcggcattggtcggt
gatgaatcttcggcgggtattctgccgagtgagctgtgtgtggtcggcgacgccgatcag
tcgatttatgcgtttcgtggtgcgacgattcgcaatattgaagagtttgagcaggattat
ccgcatgcgacgacgattgtcttggaacagaattatcgctctacgcaaaccattttggat
gccgcgaatgctgtgattgcccagaatcctggtcggcgggacaaaaaattgtggaccgct
cttggccaaggcgagcggattgtcggctgggttgccgacaatgagcatgacgaggcacgt
ttcgtggccggggagatcgacaaacttgtcgatcggggtggccgctacggcgatgttgcg
gtgatgtatcggacgaataataattcccgtgcgttagaagagatctttattcgcagcggg
attccctacacggtggtggggggaacacggttttatgaacgcaaagaaatccgggacatt
attgcctatttgaaagctgtgttaaatccggatgatacggtgagtttgcagcggatcatt
aacactcctcggcgggggatcggggataaagcgcaagaggcgattgcagcctatgcggca
agtcaccagctgagttttgggcaggcgttacggacggcagccgacggcggcattgagctg
ctggggactcgggcggtcaaagctgtgtggaagtttgtgtctttgctcgatgaactgcgg
gagtttgctgcgacagcaactgacgatgtgaccggttaccaggatcttggcgggctgatt
gaggcgtgctgtgaacaaagtgggtatcgtgcggaattggcgaagtcgaatgatccgcag
aatcagacccggttggaaaacctcaacgagctggtgtctgtggcacgagagttcactacc
gagcaggcactgttgcaagcctatgaagatatggatgcagcaaatcccgcagtagatgac
gctgcagcagctgatgttttcgcgcccgatcttgccgatgatgattctgtggcagacggc
atgcagccacaccaaagtgttggcgatgctgctgtgatcgggtcagaactcggcggggca
gatccggtggcaggactcgatattgggacaccagagcctggctcactgcaagcatttttg
gaacggatttccttggttgctgatgctgatcagattcctgattcggcagaaggccaagtg
acgttgatgacgttgcacactgctaaagggttggagtttccggtggtgtttgtggtcggc
tgggaagatggccaattcccgcatagccgttcccttggggacccggtggagcttgcagag
gaacgacgtctcgcctatgtggcgattactcgggcgaaacagcagttgtatctcacccgt
gcggcggcgcgaagttcgtggggtgccccaacacataatccgccttcgcgtttcttgcaa
gatattccagaggagcttattaactggcggcgaaccggtccggtgcgtggttttgggggt
gcctggagtgatcggtcagcaggtttttatggtggtcaatcgcgtggtagtgcaggaaca
gggctgggttccgatggctatggcagtggcaggtcacggaatagttcaacaatcccgcag
gcacagaaagggccggcgttggtgttgactgtgggcgatatggtcaatcatcaaaaacac
gggcttggcaaggttgttgaggtggaacagattggtgctttgaaagcggcacagattgac
ttcggcaacggcaataagcaaaaaattgtgttgatgccgggcatggatttcttagagaag
ctgtaa
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