Corynebacterium choanae: CCHOA_04075
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Entry
CCHOA_04075 CDS
T06925
Symbol
lsrD
Name
(GenBank) Autoinducer 2 import system permease protein LsrD
KO
K10561
rhamnose transport system permease protein
Organism
ccho
Corynebacterium choanae
Pathway
ccho02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CCHOA_04075 (lsrD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccho02000
]
CCHOA_04075 (lsrD)
Transporters [BR:
ccho02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
CCHOA_04075 (lsrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AZA13224
UniProt:
A0A3G6JB31
LinkDB
All DBs
Position
1021103..1022224
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AA seq
373 aa
AA seq
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MRTRNQSHAANTVSSSPGTMQQNTRPGRPAMPVSRKIQQLLLQERAASLSVLTLLLVVLF
WLLGRGGYLFAPFDLPYMASSLQAFVPLVILGLAEMFVITSGRGGIDLSVGAMVSLAGVV
FGHCVQTWELPLALSALIAIIAGALFGGCNGLLIGYFRFPALIATLATSYIYASLAMVAS
HQAPISGAKVAATNALTANIPLGGGILLPLQALTFFIPTMVVCWLLLEKTSWGRSLLAVG
TNDVAATYAAHNVNGVRASAYLLSGTLCGLAAVVNVAQFASARPDAGTAGNGMVLPAITI
AVLGGVLIQGGFGRVSGVVVGALLITWLNAGLLIGLQGSAGPRTQLLALGAVLLASIIVN
NIAIAKARRIPDK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgaggacacgaaaccaatcccacgctgcaaacacggtgtcgtcatcacctgggacgatg
cagcaaaatactagacctggacgtccggcgatgccggtatcgcgcaagattcagcaattg
ttacttcaggaacgcgcagcaagcttgagtgtgcttacactgcttctggtcgtcttgttt
tggctccttggtcgtggtggatatctcttcgccccgtttgatttgccgtacatggcatcg
tcgttgcaggcgtttgtgccgctggtgattctggggctcgcggaaatgtttgtcattaca
tcgggtcgtggcggtattgacttatcggtcggtgcaatggtttccctggcaggtgtggtc
tttggtcactgtgtacaaacctgggaattaccgcttgcgctatctgcgttgattgcgatc
atcgctggtgcattgttcggcggatgtaacgggctgctcattgggtattttcgtttcccg
gcgctcattgcgacacttgctacctcctacatttatgcatcgttggcgatggtggctagc
catcaggcgccaatctccggggcgaaggtcgccgcaacgaacgcactgactgcaaatatc
ccacttggcggagggattctcctgccgctgcaagccttgaccttcttcattccaaccatg
gtggtttgctggcttctgctggaaaaaacaagttggggacgatcattgctggcagtgggc
accaatgatgttgctgcaacttatgcagcacacaatgtcaatggggttcgggcaagtgca
tatcttctgtcgggaacgttatgtggtttagcagcggtcgtaaacgttgcccaattcgct
agtgcccgccccgatgcgggaactgccggaaacggcatggtgctgccggcgatcactatc
gcggtgttaggtggagtgctaatccaaggcggattcggtcgggtgagtggtgttgtcgtc
ggtgcactactgatcacatggttaaacgccggcctgcttattggcctgcaaggatctgct
ggacctcgcacacaactcctggcactcggcgcggtgttattggcttcgattatcgtaaac
aatatcgccattgcaaaagctcggcgaatacccgacaagtag
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