Corynebacterium choanae: CCHOA_04080
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Entry
CCHOA_04080 CDS
T06925
Symbol
degA1
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccho03000
]
CCHOA_04080 (degA1)
Transcription factors [BR:
ccho03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CCHOA_04080 (degA1)
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GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
DUF4350
Motif
Other DBs
NCBI-ProteinID:
AZA13225
UniProt:
A0A3G6J559
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Position
1022234..1023283
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AA seq
349 aa
AA seq
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MTPAATPSSKRPGIAQVAKLAGVAVGTVSNVLNHPDRVSPRTRTKVEQIIKELGYVPNAS
ARALNKGRSTLIGAIFFDISNPFFADSSHAIDQVARSRGATMIYTGTEQLPEVERAALKR
FVDLGVDAIVVCSTGGNDDALEQLVDLGIPVLAFAQRSESAKIPAVCIDDQRGMELIAAH
LLGLGHESFCFISEHRQAIQHRDRLAGFHRALAAQGSADGCLQLNIASGPTWMEGYREVQ
QFIATNQQLPDCFVCLNDYTAFGASKALTEAGLVPGIDVAVTGYDDLTFTELLATPLTTI
HQPITAMADYAANALLDVVEGRATDLVGKVFAPELIVRQSTVPILHDNE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgactcccgccgccactccatccagcaaacgtcccggcatcgcgcaagtagcaaaactt
gctggcgtggcggtaggaaccgtgtccaatgtgctcaatcatccagatcgggtgtcaccc
cgtacacgaacaaaagtagaacagatcatcaaagagcttggctatgtgcccaatgcgagt
gcgcgagcgttaaacaaaggccgttcgaccctcattggcgcgatcttctttgacatctcg
aatccgttcttcgctgattcttcgcacgcgatcgaccaagtcgcacggagtcgaggtgca
acgatgatctacaccggcaccgaacaactccccgaggtggaacgtgccgccctcaaacgt
ttcgttgatcttggcgtcgacgccatcgtggtgtgttccaccggcggtaatgacgacgcc
ttggagcaactcgttgatctaggtattccggtattggcttttgcgcagcgcagcgaatcg
gcgaaaatcccagccgtttgtattgacgatcagcggggaatggaacttatcgcagcacat
ttgttggggctgggacatgagagcttctgctttatcagtgaacatcggcaagccatccaa
caccgagaccgacttgctggttttcaccgggcactggccgcccaagggagcgcggacggt
tgccttcaactgaatatcgcatcagggccgacctggatggaaggctaccgcgaggtgcag
cagttcatcgccaccaatcaacagttaccggattgttttgtgtgtttgaacgattacacc
gccttcggtgcaagtaaagcgctgactgaagcagggttagttcccgggatcgatgttgcc
gtcactggatatgacgatcttactttcaccgaactgcttgccaccccgctgaccactatc
catcagccgatcacggctatggccgactatgccgcaaacgccttactcgacgttgtcgag
gggcgggcaaccgatctggtcggcaaggttttcgctcctgaactcatcgtgcggcaatcg
accgtaccgatattgcacgacaacgaatag
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