Corynebacterium choanae: CCHOA_04935
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Entry
CCHOA_04935 CDS
T06925
Symbol
polC1
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03030
DNA replication
ccho03430
Mismatch repair
ccho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCHOA_04935 (polC1)
03430 Mismatch repair
CCHOA_04935 (polC1)
03440 Homologous recombination
CCHOA_04935 (polC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccho03032
]
CCHOA_04935 (polC1)
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_04935 (polC1)
Enzymes [BR:
ccho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCHOA_04935 (polC1)
DNA replication proteins [BR:
ccho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCHOA_04935 (polC1)
DNA repair and recombination proteins [BR:
ccho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCHOA_04935 (polC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZA13395
UniProt:
A0A3G6J5M8
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All DBs
Position
1252156..1252953
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AA seq
265 aa
AA seq
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MCHRSAAGSHTRHPSPTTASNTALDVCQLVRVDTVFSTKVTPPFMFGLSAKARAARAATG
ALAEFYRTAPVDKRAPLHSLPLLAVDVETTGLSPKTDRLLSIGWVAVNGASIDAGSAYHA
IVQQPDHAPSVGQSATVHGVTDDMLAGGVPLGQVLDDLLVALRGRVMLCHYAAMEQQFLS
SATQQLYHASLHVPIVDTFALERRHMERMGTYPRGEDLRLPRVRRRYGLPAYHNHHATTD
ALACAELYLAQCANSTWSTLQHVQP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaccggtcagcagccgggtcgcatacccgccacccaagtcctaccactgccagc
aacaccgcactagatgtttgccaactggtgcgggtggacactgtattttcgacgaaagta
acaccaccgtttatgtttggactttctgcaaaagcacgggctgcacgcgcggcaaccggc
gccttagctgagttttaccgcaccgccccggttgataaacgcgccccgctgcacagcctg
ccgctgcttgccgtcgatgtggaaaccactgggttatccccgaaaaccgatcggctgctc
tctattggttgggtggcggtcaacggggccagtatcgacgctggcagcgcctaccacgct
attgtgcagcagcctgatcatgcaccgtctgtgggacagtcagcaaccgtgcacggggtt
accgacgatatgctcgccggtggtgttccactcggccaggtattagatgatttgctggta
gcgctgcgcggccgggtgatgctgtgccactatgcggcaatggaacaacaatttttaagc
agcgccacccagcagctttaccacgcatcgcttcatgtgccgatagtagacaccttcgcc
ctcgagcgacgtcatatggaacgaatgggaacctatccccgtggggaggatctgcggctt
ccgcgggttcggcgacgctacgggttacccgcttatcacaaccatcatgcaaccacagac
gccttggcctgcgcggaactgtatttagcacagtgcgcaaattccacctggtcaaccttg
cagcatgtgcagccataa
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