Corynebacterium choanae: CCHOA_06010
Help
Entry
CCHOA_06010 CDS
T06925
Symbol
ripA2
Name
(GenBank) Peptidoglycan endopeptidase RipA precursor
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccho01002
]
CCHOA_06010 (ripA2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccho01011
]
CCHOA_06010 (ripA2)
Peptidases and inhibitors [BR:
ccho01002
]
Cysteine peptidases
Family C40
CCHOA_06010 (ripA2)
Peptidoglycan biosynthesis and degradation proteins [BR:
ccho01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
CCHOA_06010 (ripA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
DUF4081
TMF_TATA_bd
Motif
Other DBs
NCBI-ProteinID:
AZA13601
UniProt:
A0A3G6J675
LinkDB
All DBs
Position
complement(1514319..1515938)
Genome browser
AA seq
539 aa
AA seq
DB search
MNISRTRVSRLRRIATSLIVSIAVGTSAHTALADPLPPVDEPVVAAPIVEQAQARLAELR
GQVFDARTRLEQALHVAAGDDAAVAALSDQVHRLEADLAATQVEIDQLHESFHGALNELL
PLNPDGSIAALDNEDIRNAFLQALSFLGMDGPARGSRLLELEGIKLRQQADLVQLQQQLE
GARAAQQRSNADRIAAEQQVGALDAQIAEATQAALSPLPPAAPVLDNPVAPAPVAPQPAV
ATATAVAAPADATYVAADIDADQIAQTVKTVATVVGVAATVLKLLNDLGADTGSSDGSAT
HTANGTTVTNDRNTPSAFDPALLRAADTLVGAAVKDTAADLTGQTTAPIGTQAEIVQKAQ
RANPGENYSLLQLYRGLDTVTPADLGLVTEDSITNFNGSREERIEAMIARAESQLGVQYA
WGGGNAAGPTKGIRDGGVADSYGDYNKVGFDCSGLVLYAFAGVGIALPHYTGSQYQRGTK
VAISDIQRGDLLFWGPNAEYHVAIYLGDGKMIEAPQSGSHVKISPVRYAGMSPYAVRML
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatctcacgcacccgtgtttcccgcctgcggcggattgctaccagtctgatcgtc
agcatcgctgtgggtaccagtgcccacactgcactcgcggatccacttccacccgttgat
gagccagttgttgctgccccgattgttgaacaagctcaagcgaggcttgctgaattgcgg
gggcaagtatttgatgcccgtactcgcttagagcaagcacttcatgttgccgccggcgat
gacgctgccgtagctgccctgagcgaccaagttcaccggttagaagctgaccttgctgcg
acacaggttgagattgaccagctgcatgaaagcttccatggtgcgctcaacgagctgttg
ccgcttaacccagatggcagtattgctgcgttagacaatgaagatattcgcaacgcgttc
ttgcaggcgctttccttcctgggaatggacggtcctgcgcgcggcagtcgcctgctggag
ttagaaggcatcaaacttcgccaacaggccgatcttgtacagttgcagcagcaactcgag
ggggctcgggcagcgcagcagcgcagcaacgctgatcgaattgctgccgaacaacaggta
ggcgccttagatgcgcaaattgctgaagctactcaagccgccttatccccgctgccacca
gcagcaccagtgcttgataatccggtggcacctgcaccggttgcaccacagcccgcggtg
gcgaccgcaactgcggttgctgcaccagcagatgcaacctatgtagccgctgatattgat
gccgatcagattgcccaaacagtgaaaactgtggcaacggtggtcggtgtcgctgcgact
gtgttgaaactgctcaatgatcttggcgccgatactggttcctcggatggcagtgcgacc
catactgccaacggcaccacggtgactaacgatcgcaataccccttcggcattcgatccg
gcgttgctgcgggcggcggacacgctcgtcggggcggcagtgaaagatactgcagcagat
ttgaccgggcagactactgcaccaattggtacccaagctgagatcgtgcaaaaagcacaa
cgggcaaacccgggcgaaaactattcgctgctgcagctctaccgcggactcgataccgtc
accccggctgacttgggattggtcactgaagattcgatcacgaacttcaacggcagccga
gaagaacgaatcgaagcgatgatcgcccgtgccgagtcgcagcttggcgtgcaatatgcg
tggggcggcggtaacgcagccggaccgacgaagggtattcgcgatggcggtgtcgctgac
tcgtatggcgactacaacaaggtcggattcgactgctccgggctggtgctgtacgcgttc
gctggtgtcggtattgcgttgccacactataccggcagccaatatcagcgcgggacgaag
gttgcgatctctgatattcagcgtggtgacctgctgttctggggtcccaatgcggaatac
cacgtggcaatctacttaggtgacggcaaaatgatcgaggcaccacaatctggtagccac
gtcaagatcagccctgtgcgctacgccggtatgagcccatacgcagtgcggatgctctaa
DBGET
integrated database retrieval system
