Corynebacterium choanae: CCHOA_06955
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Entry
CCHOA_06955 CDS
T06925
Symbol
miaB
Name
(GenBank) (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccho03016
]
CCHOA_06955 (miaB)
Enzymes [BR:
ccho01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CCHOA_06955 (miaB)
Transfer RNA biogenesis [BR:
ccho03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CCHOA_06955 (miaB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
AZA13783
UniProt:
A0A3G6J7N1
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Position
complement(1735418..1736989)
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AA seq
523 aa
AA seq
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MPNVIEPETSTATSTNGIAPRTYEVRTFGCQMNVHDSERLAGLLEDAGYQPAGESVEPDL
VVLNTCAVRENADMRLYGTLGSLKSVKERHPGMQIAVGGCLAQKDKAVVVEKAPWVDVVF
GTHNIGSLPALLQRAEHNRKAQVEIVDALEQFPSVLPAKRESAYSGWVSVSVGCNNTCTF
CIVPSLRGKEADRRPGDILAEVQALVEQGVVEVTLLGQNVNAYGVHFADPDLERDRSAFS
KLLRACGEIEGLERVRFTSPHPAEFTDDVIDAMAETPNVCPQLHMPLQSGSDRILKEMRR
SYRTKKFLTILEKVREKIPHAAITTDIIVGFPGETEEDFQATLDVVEQARFASAFTFQYS
PRPGTPAATYPNQVPPEVVTERYGRLIALQERICLEENTRLIGTEQELLVQAGEQRKGKD
RGRLAGRSRDGRLVHFAPHPANEGAIDRSIRPGDFVTVTITDAAPHFLLADSGVQTHRRT
KAGDHHEAGQMPTTGQTGVGLGLPKIGQPATPPPTTGCGTGSC
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgtgattgaaccagagacatcgaccgcgaccagcaccaacggcatcgccccc
cgcacctatgaagtgcgcacttttggctgccagatgaatgttcacgactcggaacggctt
gcaggtctgttggaagatgccgggtatcagccagcaggggagtcggttgaacctgatctt
gtagtgctgaacacttgtgctgttcgcgagaatgctgacatgcggctgtatggcacgttg
ggttctctgaaaagtgtcaaggaacgccatccgggcatgcagattgccgtcggcggctgt
ctcgcgcagaaagataaagctgttgtcgtcgagaaagcgccctgggtcgatgtggttttt
ggaacccataacatcggttcactgcctgcgttgttgcaacgagcggaacacaatcgcaaa
gctcaggttgagattgttgacgcgttagagcagtttccgtcggtgctcccagctaaacgc
gaatcggcttattccggttgggtgagtgtgtcggttggttgtaacaacacctgcacgttt
tgtattgtcccttcgctgcggggcaaggaagctgatcgccgaccgggggatatcctggcc
gaggtgcaggcactcgtcgagcaaggcgtggtagaggtcaccttgctggggcaaaacgtg
aatgcctacggtgtgcactttgcagaccctgatttggaacgtgatcgaagcgcgttttcg
aagttgctgcgtgcctgcggagaaattgaaggcttagagcgggttcgttttacctccccg
catcctgcggaatttactgatgatgtcatcgatgcgatggccgaaacacccaatgtttgt
ccgcagctgcatatgccgttgcagtcgggttccgaccggattctcaaagagatgcggcga
agctaccgaacgaagaagttcttaacaattttggagaaggtgcgggaaaagattccgcat
gccgccattactaccgacattattgtgggtttccccggcgagactgaggaagattttcaa
gcaaccctcgatgtggtggaacaagcacggtttgcttcggcgtttacgttccaatacagc
ccacggccgggaacaccggcagcgacctatcctaaccaggtgccaccggaggtggtgacc
gagcgttatggtcgactcattgctttacaggaacgtatctgcctggaggaaaacacccgg
ctgattggcacagagcaggaattgctcgtgcaggcaggtgagcagcgcaaaggtaaggat
cggggtcgcttagctggacggtcacgggacggtaggctcgtccattttgctcctcatcca
gcgaacgagggtgccatcgatcggtcgatccgacctggtgactttgtcactgtcacaatc
actgatgcggcgccgcactttttgctggccgatagcggggtgcagacgcaccgccgtacc
aaggcgggtgaccatcacgaggcaggtcaaatgcccaccactggtcaaactggtgtgggg
ttagggctgccaaagattggccaaccggcaacaccgccgcctacgaccgggtgtggcacc
ggtagctgctaa
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