Corynebacterium choanae: CCHOA_07090
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Entry
CCHOA_07090 CDS
T06925
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CCHOA_07090 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccho03019
]
CCHOA_07090 (pnp)
03016 Transfer RNA biogenesis [BR:
ccho03016
]
CCHOA_07090 (pnp)
Enzymes [BR:
ccho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CCHOA_07090 (pnp)
Messenger RNA biogenesis [BR:
ccho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CCHOA_07090 (pnp)
Transfer RNA biogenesis [BR:
ccho03016
]
Prokaryotic type
tRNA degradation factors
CCHOA_07090 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
KH_1
S1
RNase_PH_C
KH_2
Coatomer_g_Cpla
Motif
Other DBs
NCBI-ProteinID:
AZA13810
UniProt:
A0A3G6JB59
LinkDB
All DBs
Position
complement(1768532..1770769)
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AA seq
745 aa
AA seq
DB search
MKDVTFFEDEYGVSTVEATIDNGDFGTRVIRFETGLLARQAGGSVTAYLDDDTMLLATTT
ASSQPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILACRLIDRPLRPTFVK
GLRNEVQCVITVLSMDPEEMYDVVAINAASAATQLSGLPVSGAVGGVRMALIVDDEHPQG
QWVAFPNYTQHKQAIFEMVVAGRMIETGKGKRRREDVAIMMVEAGATESVVERIAEGAPA
PTEQVVAEGLEAAKPFIATLCKAQQVLAEKTAKDTQEFPLFPAYEDDVFAAVEKAATSKI
EKLMTIAGKQDRDEATAAYLDEISEQFAEKFPERDKEVRNAFNAITKQIVRRRILTDHFR
IDGRGVKDIRHVEVEVALIPRAHGSALFERGETQIMGVTTLDMLKMQQQIDSLSPETSKR
YIHHYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSN
GSTSMGSVCASTLSMLNAGVPLKASVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDM
DFKVAGTAEFVTALQLDTKLDGIPSKVLAGALEQAKEARLEILDTMAQVVDGPDEMSPLA
PRIVSVKIPVSKIGEVIGPKGKNINQLSETTGADISIEDDGTVYVSAQNGESAQKAVDEI
NAIANPQLPQVGERFYGTVVKTTHFGAFVSLLPNRDGLIHISKLGGKTRIERVEDVVNVG
DRIWVEIADIDDRNKISLVPVDEEK
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacgttacattttttgaagacgagtacggcgtctcaactgtcgaagcaaccatc
gataatggggacttcggcacccgcgttatccggtttgaaactggtctgctggctcggcag
gctggcggttcggttaccgcatatttagatgatgacacgatgttgctggcaaccaccact
gccagcagccaaccgcgggagggattcgacttcttcccgctgaccgttgatgtggaagag
cggatgtatgccgccggccgtattcctggttcgttcttccggcgggaagggcgtccttca
acggatgctattttggcttgtcgcctcatcgaccgaccgctgcgccccacctttgtgaaa
gggctgcgcaacgaagtgcaatgtgtgatcactgtgctgtcgatggatccggaagaaatg
tatgacgtggtggcaattaacgctgcctctgcggcgacacaactgtccggtctgccggtt
tctggggcagtcggtggtgtgcgcatggcactgatcgtcgacgatgaacatccccaaggc
cagtgggttgcgttcccgaactacacccagcataagcaggccatcttcgagatggtggta
gccggtcgcatgattgaaactggcaagggtaagcgtcgtcgtgaagatgtggccatcatg
atggtggaagcgggcgctacagaatctgtggttgagcggatcgcggaaggcgccccagcc
ccaactgagcaagttgtggccgaaggtttggaagctgcaaaaccgtttatcgcaaccttg
tgcaaggcacagcaggtgttggctgaaaaaacggcgaaggatacccaagagttcccgctg
ttcccagcctatgaagacgatgtgttcgccgctgttgaaaaggctgccaccagcaaaatt
gaaaagctgatgactattgctggtaagcaggatcgcgacgaagcaactgctgcatatctc
gatgagatctcggagcagttcgccgagaagttcccggagcgggataaggaagtccgtaac
gcgttcaacgccatcaccaagcagattgtgcggcgtcgaattctcaccgatcacttccgt
atcgatgggcgtggcgtgaaagatattcgccacgttgaggtggaagttgctctcatccca
cgggcacacgggtcggcgctgttcgaacgtggcgaaacccaaatcatgggtgtgacgaca
ctggatatgctgaaaatgcagcagcaaatcgattcgctgtcgccggaaacgtcgaagcgc
tacattcaccactacaacttcccgccatactccaccggcgaaactggtcgagttggttcc
ccgaagcgtcgcgaaatcgggcacggcgcccttgcggaacgtgcactggtgccagtgtta
ccttcccgggaagagttcccctatgccatccgtcaggtttctgaggcgctcggctcgaat
ggttccacttcgatgggatcggtgtgtgcctccaccttgtcgatgctcaacgctggtgta
ccgctgaaagcatcggttgcaggtattgccatggggctggtttccgatgaggtcgacggt
gaaactcgctatgtggcattgaccgatatcctcggtgcggaagacgcattcggcgatatg
gactttaaggttgcaggtaccgcagagttcgttacagcgttgcagcttgacaccaaactc
gacggtattccgtcgaaggtgctcgcaggtgcgttggagcaggctaaagaagcacgcctg
gagatcctggacaccatggcgcaggtggtcgacgggccggatgaaatgtcgccgctggca
ccacgcattgtttcggtgaagatccctgtgtcgaagattggtgaagtgatcgggccgaag
ggcaagaacatcaaccagctttcggagaccaccggtgcagatatctccatcgaagatgac
ggcacagtgtatgtgtcggcacaaaacggggaatcagcgcagaaagctgtcgacgagatt
aacgctatcgctaatccgcaactgccgcaggttggtgaacggttctacggcacggtggtg
aaaaccacccactttggtgcgtttgtttccttgctgccgaaccgtgacggtctcattcac
atctccaagctgggtgggaaaacccgtattgagcgcgtcgaagatgtagtcaatgtgggc
gaccggatttgggttgagattgctgacatcgacgaccgcaacaagatttcgctggtgccg
gttgacgaagaaaaataa
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