Corynebacterium choanae: CCHOA_07105
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Entry
CCHOA_07105 CDS
T06925
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccho03016
]
CCHOA_07105 (truB)
Enzymes [BR:
ccho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CCHOA_07105 (truB)
Transfer RNA biogenesis [BR:
ccho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCHOA_07105 (truB)
Prokaryotic type
CCHOA_07105 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PUA
DKCLD
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZA13813
UniProt:
A0A3G6J7R2
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All DBs
Position
1772928..1773845
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AA seq
305 aa
AA seq
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MTAASNTRPFPLADSGVIVIDKPLHITSHDVVAAVRRAMGTRKVGHAGTLDPLASGVLVV
GVQRGTKALAHLVGLSKTYEATVCFGATSTTEDAGGVITPTADASSLTLSDLAAVAPQFR
GDILQRPSSVSAIKINGKRAHQRVREGEEVTIPPRPVTIDQLEFTSDPTYRGATMEIAMR
VHCSSGTYIRALARDLGEAVGTGTYLTDLRRTAVGPFTVAQSIDLDTLAAEPHLTHSIDE
ALQAVYPTLHVDDSEYAALAQGKWLEPRGLVGVHAAVNRDGQVVALVKESGKRLATTFVA
RPSTL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcaagcaacacccgtccatttcccctcgccgattctggtgtcattgtcatc
gacaaaccactgcacatcacctcccacgacgtggtggcggcggtgcggcgagccatgggc
acccgcaaggttggtcacgctggaacgctagatccgctggctagtggcgtgctcgtggtc
ggagtacagcggggtaccaaagcattggcacatctcgtaggactgtcgaaaacctatgag
gcaacagtgtgcttcggtgcaacatctaccactgaagatgccggtggtgtaatcaccccc
acggcagacgcctcatcgttgacactgagcgacctggcagcagttgcaccacaattccgc
ggcgatattttgcagcggccgtcatcagtttcagcaatcaaaattaacggcaaacgcgca
catcagcgtgtccgtgagggcgaagaggtcaccatcccgccacgtccagtaactattgac
cagctggaattcacctccgaccccacctatcggggtgccaccatggaaatcgctatgcgg
gtgcactgttcctccggcacctatattagggcgcttgctcgtgacttaggggaagcggtt
ggcaccgggacatatctcaccgatttgcggcgcactgcggtagggccgttcactgttgca
cagtctatcgacctcgacacactcgctgctgaaccgcacctaacccactccatcgacgaa
gcgttgcaagcggtgtatcccacgttgcacgtcgatgactccgaatatgccgcccttgcc
caaggcaaatggctcgaaccgcgagggctcgtcggtgtccatgccgcagtcaaccgggac
ggtcaggtagtggctttagtaaaagagtccggtaaacgtctggccaccacatttgtggca
cgcccatcgacactgtag
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