Corynebacterium choanae: CCHOA_07645
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Entry
CCHOA_07645 CDS
T06925
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ccho
Corynebacterium choanae
Pathway
ccho03030
DNA replication
ccho03430
Mismatch repair
ccho03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CCHOA_07645 (dnaE1)
03430 Mismatch repair
CCHOA_07645 (dnaE1)
03440 Homologous recombination
CCHOA_07645 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccho03032
]
CCHOA_07645 (dnaE1)
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_07645 (dnaE1)
Enzymes [BR:
ccho01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CCHOA_07645 (dnaE1)
DNA replication proteins [BR:
ccho03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CCHOA_07645 (dnaE1)
DNA repair and recombination proteins [BR:
ccho03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CCHOA_07645 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AZA13921
UniProt:
A0A3G6J729
LinkDB
All DBs
Position
complement(1915059..1918610)
Genome browser
AA seq
1183 aa
AA seq
DB search
MSAGSFVHLHNHTEYSMLDGMAKVDLLAEEVVRQKMPAVGMTDHGNMFGADAFYHAMTKA
GVKPIIGIEAYMAPESRFNKDRIRWGDMSQKSDDVSGSGAYLHQTMVAENATGLKNLFYL
SSMASYEGQLGKWPRMDAELIAEHSTGIIATTGCPSGDVQTRLRLGQFDEALAAAAKWQD
IYGKENFFLELMDHGIDIERRVRDELLEIGKKLNLPPLVTNDCHYVLESQAGPHEALLCV
QTGATLQDTNRFKFDGSGYYVKSAEQMRAQWDDLVPGACDNTLAIAERVESYAEIWEPHT
HDRMPIANVPDGHTPTSWLKHQVEEGLRERFPGAEVPQEYTDRAAYEIEVIDIKGYPSYF
LIVAELIKHARSVGIRVGPGRGSAAGSLVAYALTITNIDPIEHGLLFERFLNPERPSAPD
IDIDFDDRRRGEMVRYAAENWGVDKVAQVITFGTVKTKQAIKDAARVHYGQEGYRKADDI
TKALPPAIMAKDIPLKGIQDPQHERYAEAAEVRAMIENDQQVATIYETALGMEGVIRQAG
VHACAVIMASVPLLDHIPMWKRPADGALITGWPYPACEQIGLLKMDFLGLRNLTVIGDCL
ENIKTNRGIDLDLENLSVVDEPTYELLSRGDTLGVFQLDSGGMRELLKRMEPTRFDDIVA
ALALYRPGPMGMGAHWAYADRKNGRQDITPIHPELEEPLREILEETHGLIVYQEQIMRIS
QKVANYTAGQADGFRKAMGKKKPEVLAAEFKNFSAGMQSNGFSDAAIKALWGTIEPFASY
AFNKSHAAGYGLVSFWTAYLKANYTSEYMAALLTSVSDNKDKSAIYLSDCRHLGVRVLSP
DVNDSALTFQSVGEDIRFGLGAIRNVGADVVASIVKTRTEKGAFTSFSDYLDKIELTACN
KRVTESLIKAGAFDSLDCSRQGLHLVFEDAIDSILSTKKAAEQGQGDLFAGFGEVSSDAA
FSVKVPEGEWDRKAKLSFEKEMLGLYVSSHPLDGFEQSLMAQVNTSLTEILSGEVRDRQD
VVIGGIITKVDRRISKKDGATWAIVTIEDHNGASVELLLFARAFAAYQSLVAEDNIVIAQ
ARINIRDDRMSVFCSELKLADLGTGSGTGAPLRLVLQSHQCSPQRLEKLKDVLHQNPGES
DVYVRIECNDRQTTLLLPQEYRVDRSSSLMGDLKASLGPGILG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccggatcatttgttcaccttcacaatcacaccgaatattccatgctcgacgga
atggcgaaggtggacttgcttgccgaagaagttgtccggcaaaagatgccggccgttggc
atgacagaccatggcaatatgttcggcgccgacgcgttttatcatgcaatgactaaagct
ggggtcaaacccatcattggcattgaagcgtatatggcgcccgaatcgcggttcaacaag
gaccgtatccggtggggcgacatgagccagaaaagcgacgacgtctccggttcgggcgcc
tatttgcaccaaacgatggtggccgagaacgccactggcttgaaaaatctgttctatctc
tcctccatggcatcctacgaaggacagctgggtaaatggccgcgcatggacgcggaactc
attgctgaacattccaccggtattatcgccaccaccggttgcccttcgggggatgtgcaa
acacggctccgcctcggacagttcgatgaagccctcgctgcagccgccaaatggcaagac
atatacggcaaagaaaacttcttcctcgagttgatggatcacggcatcgacatcgaacgt
cgtgtccgtgacgaactgctagaaatcggcaaaaagctcaacctgccgccgctggtcacc
aatgactgccactatgtgctggagtcccaagccggcccgcacgaggcgctgctgtgtgtg
caaaccggagcaacattgcaggacaccaaccggttcaagtttgacggttcgggctactat
gtgaaatccgcggagcaaatgcgtgcccaatgggatgatctggtacctggtgcctgcgac
aacacgctggccattgcagagcgggtggaatcctatgcggaaatctgggagccacacacc
catgaccggatgccgattgccaacgttcctgacggacacacccccacctcgtggttgaag
catcaggtggaagaaggactacgggaacggttccccggcgcggaggtgccgcaggaatat
accgatcgtgccgcctatgagatcgaagtgatcgacatcaaaggctatccgtcgtacttc
cttatcgtcgcagaactgattaaacatgcccgctcagtggggatccgggtcgggccgggg
cgtggttcggcggcaggttccctggttgcctacgcgttgaccatcaccaatattgacccc
atcgaacatgggctgctgtttgagcgcttcctcaacccggagcgtccctcagcaccagat
attgatattgacttcgacgatcgtcgtcgcggtgagatggtgcgctacgccgccgaaaac
tggggtgtggataaagtcgcgcaggtgatcacctttggcacggtgaaaaccaaacaagcc
atcaaagatgctgcccgagtccactatgggcaagagggctatcggaaagccgacgacatc
accaaagcgttgccgccggcgattatggcgaaagacattccgctgaaaggcattcaggat
ccgcaacacgaacgctatgccgaggcggctgaagtccgcgcaatgatcgaaaatgatcag
caagtcgccacaatctatgagacggcgcttggcatggaaggggtgattcgacaggcaggc
gtccacgcgtgtgcggtgattatggcttcggtgccgctgcttgaccatatccctatgtgg
aaacgtcccgccgatggggcgttgatcaccggctggccctatccggcttgtgagcaaatt
ggtttgctgaaaatggacttcctggggttgcgtaacctcacggtgatcggcgactgtttg
gaaaacattaaaaccaaccgtggcatcgatctggatttggaaaacctttccgtagttgat
gaacctacctacgagttgctgtcccgcggggacacgctaggggtgttccagctcgactcg
ggtggtatgcgtgaactgctgaaacgtatggagccaacccgcttcgatgatattgtcgcc
gctcttgcgctgtaccgtccaggtccgatgggcatgggggcgcactgggcttatgccgac
cggaaaaatggacggcaagatattacgccgatccatccggaacttgaggaacctctccgg
gagattctcgaagaaacccatggtcttatcgtctaccaagagcagatcatgcgtatctcg
cagaaggtggcaaattacaccgccggtcaagctgatggtttccgcaaagcgatgggtaaa
aagaagccggaagtgttggcggcggaatttaaaaacttctctgccggtatgcagtccaat
gggttctctgatgcagcaatcaaagcactgtggggcacgattgaaccgttcgcatcctac
gcgtttaacaaatcgcatgcggcaggctacggtttggtgagtttctggacggcgtatctt
aaagcgaactacaccagtgaatacatggctgcactgttgacgagtgtgtccgataataaa
gacaagtcagcaatctatctgtctgattgtcgccatcttggtgtgcgggtgcttagccct
gatgtaaacgactctgcgctgaccttccaatcggttggggaagatatccgtttcggcctt
ggtgctattcgcaatgtgggcgccgatgtggtggcttcaattgtgaaaacacgtaccgaa
aaaggcgcgtttaccagtttcagtgattatctggacaaaatcgagctcaccgcctgcaat
aagcgggtcaccgagtcgctgattaaagctggtgcgttcgattcgctggattgttcccgg
caagggttgcatctggtgtttgaagatgccattgactcgattttgagcacgaagaaagcc
gccgaacaggggcagggcgatctgtttgctggttttggtgaagtatcttccgatgcggcg
ttttcggtgaaggttccggaaggggagtgggatcgaaaagcgaaactcagctttgaaaag
gaaatgctgggtctctatgtctcaagccacccgttggatggatttgagcagtcgctgatg
gcacaggtgaatacttcgctgactgagattctttccggggaggttcgggatcggcaagat
gtcgtcatcggggggattatcaccaaagttgatcggcgaatctcgaagaaagacggggca
acatgggcgattgtcaccattgaagatcacaatggtgcctcggttgagttgttgctgttc
gcaagagcgttcgctgcgtatcagtctctggtggcagaggataatattgtcattgcgcag
gctcggattaatattcgcgacgaccggatgtcggtgttttgttccgaattgaagctcgct
gatttgggtaccggatcaggtacaggcgccccgttgcggctggtgttacagtcccatcag
tgttcgccacagcggttggaaaagttgaaggatgtgttgcatcaaaaccctggcgagtcg
gatgtgtatgtgcgtattgaatgtaacgatcgccagacgacgctgctgctgccacaggaa
tatcgggtggatcggtcttcgtcgctgatgggcgatttgaaggcctcgcttggccctggg
attttgggttaa
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