Corynebacterium choanae: CCHOA_09495
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Entry
CCHOA_09495 CDS
T06925
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccho03016
]
CCHOA_09495 (truA)
Enzymes [BR:
ccho01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CCHOA_09495 (truA)
Transfer RNA biogenesis [BR:
ccho03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CCHOA_09495 (truA)
Prokaryotic type
CCHOA_09495 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AZA14282
UniProt:
A0A3G6J914
LinkDB
All DBs
Position
complement(2363496..2364428)
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AA seq
310 aa
AA seq
DB search
MTDASADSLIRLRLDIAYDGTDFHGWAKQADPAIRTVQHTIEQAFGLIFQTPCPLTVAGR
TDAGVHATGQVAHVDVPAKGLETRSIDGDPTRLVRRLTRLLPDDIRIHAVTVAPDGFDAR
FSALRRHYNYRITTAACGPLPQTRLFTAAWPRRVDITLMQQATHALLGLHDFAAYSKYRP
GATTVRDLQAFSWREVSTAQEPDTYEATVIADAFTWSMVRSLVGATLAVGEGKQPISFTE
AMLNERSRSSKIPVAPACGLTLTQVDYPAAAALAARAEQTRGVRVLPGEETRAVGKGCPE
TNPYFHGVQE
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgactgacgcatccgcggattccctgatccgcctacggctcgatatcgcctacgacggc
accgactttcacggttgggcaaaacaagccgatccggcgatccggacggtacaacacacc
atcgagcaagccttcggactgattttccaaaccccttgtccgttgacagttgctggacgc
accgatgccggggtgcacgccaccgggcaagtagcccacgtcgatgtgccagccaaaggc
ttggaaacccgctcgatcgacggggatcccacccggcttgttcgacgtctcacccggctg
ctcccagatgacattcggattcacgcggtaacagttgcaccagatggctttgatgcaagg
ttttctgcgctgcggcgacactacaactatcggattactaccgccgcctgtggtccgctc
ccgcaaactcggcttttcactgctgcatggccacgccgcgtcgacattacgctcatgcaa
caagcaacccatgcactcttgggattgcacgattttgccgcatattccaagtatcgtccc
ggggccaccacagtgcgggatctgcaagcgttttcctggcgggaagtgtctaccgcccag
gaaccagatacctatgaggcgaccgtcatcgctgacgccttcacctggtcgatggtgcgc
tccctggtgggggcaaccttggccgtcggcgaaggcaaacagccgatcagtttcaccgaa
gcaatgctcaacgaacgcagtcggagttcgaaaattccggtggcacccgcctgcggactc
accctcacccaggtggattatcctgccgctgccgcattagcggcgcgtgccgaacaaacc
agaggtgtgcgtgtcctccccggtgaggaaacacgagcggttgggaaaggctgcccggaa
acaaatccctatttccatggcgtgcaggaataa
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