Corynebacterium choanae: CCHOA_10190
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Entry
CCHOA_10190 CDS
T06925
Symbol
bca2
Name
(GenBank) C protein alpha-antigen precursor
Organism
ccho
Corynebacterium choanae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rib
Cadherin
RibLong
Big_3_2
He_PIG
GspA_SrpA_N
DUF4625
Big_13
Big_3_3
InlK_D3
DUF2808
Bact_surface_Ig-like
Motif
Other DBs
NCBI-ProteinID:
AZA14421
UniProt:
A0A3G6J8I9
LinkDB
All DBs
Position
complement(2499742..2506248)
Genome browser
AA seq
2168 aa
AA seq
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MKHAPRQARVGLTAHSMRRVRLAAATSSVALAFSVVAPVAPGPLSLNPFGTAVAAAEDNA
FPTDNPNASYWPLPPNTEISTNRSLMASGISYDRKLSDNSFNMLVNYRAAFSPFGTFQKG
VKWIYLRFDPRIAPYIDTITMKEQNEANAGTGVVIAYERLGEKITPETPANINWESGEPE
GDVKDPYANEDNVWRFVNDAHNDYATFDAQPDQRWRLGGNWGVFPFAPGEQAKYTADVVV
TLKKPIDEVIAETGDNAFWAQARWQGNSSFEVASVVDPNSINRSTTIDLDDANSNYAYND
WLVAPSFNTLNFDYMGYTMYPDGKQRKQQTPQTTQLRIAQIRSHGTFSLNTMGFGSRLKP
LDFHVKLDENTINALTGPVIVWQTTVPYGGSVNNDQTTLAEPIILDPELFKENNGEVVIT
IRQEKEGQPGVYYYPPKNIFDKANTRVFEANSLNAFGDATVIDAPLSMEKLGQIACGGPE
MVNGGAYTWITGIDRDGTEKTLRFGESNAFYAVPSSPPPTITSVDADGNPASIQYTDTAL
SGTSAPSAKITIVANPKPDAVPEDGSDAAVDTIVIGTGEADENGKFTVNFDDTLSKLGIT
PDKYVLAVVAQNDFGLPSCEVAIAISGMVQAYIPAYTGKIADTMDANAAVKPGGQAAATP
QVVDANGEPAPADDITGYTLGELPDGVTADADAAAKNPQLALVTLDETTGEVTFQPGADF
PAGDVTIPVTITYADGSSEPVAGRKPASPAGATFHVSQYGTIDTQVKITKPDGSALDDTV
TPDTKVTYEATSTVSNGDTAAGATVTIKPDPDAPFDKDAVPQLTKDGQPLTVDEDYSVVT
NDDGSITITFKEPLTDGTVITTKIPATVVGDAADGDKEVGGDGYTDSGTSDVDGPDGKTD
PVDNGTDPSTEGAKVDTQPPTIDSQPGIELTGDRDVPADTVIATVSDDTTDPKDLTVEVT
GLPKGVDFTVDEETGEIKLAGKPADVEESTDYTVTIKVTDKAGNTTEKTVKVTVNPKSSD
TRDYEPPTITDVTDVSVTAGSSIGDDAVIATVGDDVTANDKLQVTVQGLPDGVGFKVHPE
TGAVSLYGTPTGLKETTDYKVTITVTDEAGNSNEATATVTVNVTKQLNDSNEPTAQKIEV
PVGGTPEAKDGIANFTELPEGTTAQFAKPVDTSEAGEFSAEVIVTYPDGSKDHIVVPVSV
VADKIAPTISETNNVTLAGGQPVPEGTVIGKVSDDVTSIADLDVTIEGLPSEVTATVDPQ
TGEIKLTGKSADVEESTDYTVTITVTDKAGNTTTSDVTVTVTPVTDADKYAPTGKTIATE
LGGSPDAASGIGNSDELPDGTSFDFATPVDTDSPGTKDAIIVVTYPDGTEDEVPVKVVVI
DPAADLDDDGIPNAKDPDIDGDGVNNADEIAADLDPTNPDTDGDGQTDGEEDTDHDGKTN
TEESEVPQNPDGSDIEVTDENNDGMGDVDVTDTDPEDGVPDIIDNLGPDGDIDGDGIPNS
QDPDIDGDGVNNSDEKEAGLDPFNPDTDGDGTRDGDEDADGDGKKNSDESFVPEDPETGK
DLPVTNTDGDGIADPGVTDRDNDGKPDITDPNDTVDTTGDGDIDGDGIPNSQDPDIDGDG
VNNSDEQAAGLDPYDPTTNDRETGQPSDDGKKDADGDDKSNAEESFVPKGEDGEDLPVTD
TDGDGMADPGVTDRDNDGNPDITDLNDTVDTTGDGDIDGDGIPNSQDPDIDGDGVNNSDE
QAAGLDPYDPTTNDRETGQPSDDGKKDTDGDGIDNATESEVKQDDTGKDIPVTDTDGDGM
GDPGITDKDGNGVSDVVQAQVHYGLIAVARPATGANTSAKNVLVVEKKSVTRALPETVSN
VVIDPSWTAPQGVTATVDADGDVVLTVTNDADLYDEAAPLQVPVIVTFTYGRVSNVTADF
IIYDAAAVAPEGDLDGDGIPNAQDPDIDGDGVNNSDEIAAGLDPFDKDTGNTGKTDGDKD
NDEDGLNNDSESYVPAGSVEDIDGDGIADPGITDQNGNGIADLVDKDSVKAIADGEPEED
GGLSSKIKGSLGSAGGSSAGSILPVVLGLGALAGIIGLIANNPDLVAMVNGQFLPGAPAP
AVEPAPAPAPADQVPGPSKGLVKQPARDGASNAVLAVTGANVTGVGVAGLLAMVLGGLLV
FARKRRNS
NT seq
6507 nt
NT seq
+upstream
nt +downstream
nt
atgaagcacgcaccacgacaagcccgagtcggtctgacggcgcacagtatgcgacgggta
cgcctcgctgcagctacctcttcggtggcgctggcgttctctgttgtcgcccctgttgcg
ccagggccgctatcgctgaaccccttcggtacagctgttgccgccgccgaggacaatgcc
ttcccgacggacaatcccaacgccagctattggccactgccgcccaacacggaaatctct
acaaacaggagcctgatggcctccggtatctcctatgaccgcaagttaagcgataacagc
ttcaacatgctggtgaactaccgtgccgcgttctctccgtttggtaccttccaaaaaggc
gtgaaatggatctatttacggttcgatccgcgcattgctccctacatcgacaccatcacg
atgaaagagcaaaacgaggcgaacgctggtactggtgttgtcatcgcctatgagcggctt
ggtgagaaaatcacccctgagactccagcgaatattaactgggaaagcggtgagccggag
ggagatgtcaaagacccctacgccaacgaagataacgtgtggcgtttcgtcaacgacgcc
cacaatgactacgccaccttcgatgcgcaacctgatcagcgctggcgcctcggcgggaac
tggggcgtgttccccttcgcgccaggtgagcaggcaaagtacaccgcggacgtggtcgtt
accttaaagaagccgatcgacgaagttatcgccgagaccggcgataacgccttctgggcg
caggcccggtggcagggcaactcgtcgtttgaggttgcaagcgttgttgacccgaactcg
atcaaccgctccaccaccatcgatttggatgatgcgaacagcaattatgcctacaacgac
tggctggttgctccgtcgtttaacacgctcaacttcgactacatgggctacaccatgtat
ccagatggcaagcaacgaaagcagcaaacgccgcaaaccacgcagctgcgcatcgcacag
attcgctcacacggtaccttcagcttgaacacaatggggttcggtagccggttgaagccg
ctcgacttccacgtcaagctcgacgaaaacaccattaacgcgctcaccggtccggtgatt
gtctggcagacgacagtgccatacggcggttccgtgaacaatgatcagaccacgttggcg
gagccaattatcctcgacccagagctgttcaaggaaaataacggtgaagtggtcatcacc
atccgccaggaaaaagaaggacagcctggcgtttactactatccgccgaagaatattttc
gacaaggcgaacacgcgcgtgttcgaggcgaactcgctcaacgcctttggtgacgcaact
gttattgatgccccgctgagtatggagaagctcgggcagattgcctgtggcggtcctgag
atggtcaacggtggtgcctacacgtggatcaccggcatcgatcgagacggcacggaaaag
accctccgctttggtgagtcgaatgcgttctatgcagtgccttcctctccgccgccgacg
attacctcggttgacgccgacggtaatcctgcgtcgattcaatacaccgatactgctctc
agcggcacctcggcgccaagtgcaaagatcaccatcgtcgcaaacccgaagccggacgcc
gtcccagaggatggttccgatgcggcggttgacactattgtcatcggcaccggtgaagcg
gatgaaaacggtaagttcactgtcaacttcgacgacacgctctcgaagctcggcatcacc
ccggacaagtatgtgctggctgtggtggcacaaaatgatttcggtttgccgtcgtgcgaa
gttgccatcgctatcagtggtatggtgcaggcgtatatcccggcctacactggcaaaatt
gctgacacgatggacgctaatgcggccgtcaaacctggtgggcaagccgctgcaacccca
caggttgtcgacgccaatggcgaacctgcacccgcggacgacatcaccggctacacctta
ggggagctgcctgacggggtgaccgccgatgcggatgcggccgcgaaaaatccgcagcta
gcactggttacgctcgatgagaccaccggggaagtgaccttccaaccaggtgcggacttc
cccgctggcgatgtcacgatcccagtaaccatcacctatgccgacggctcgtctgaacca
gtagcgggacgcaagcctgcaagccctgctggtgcgaccttccatgtctcccaatatggc
accatcgacacgcaggtgaagatcaccaagccggatggatccgcgctggatgacaccgtt
acccctgatacaaaggtgacctacgaggcaacctcgacggtaagtaacggcgatacggcc
gctggtgcgacggtgaccatcaaacccgatccggatgcgcctttcgataaggatgcagtc
ccgcagctcaccaaggacgggcagccgctcaccgtcgatgaggactactctgttgttacc
aacgatgacggctcgatcactatcacgttcaaagaaccgctgaccgacggcacggtgatc
accacgaagattccagccacggttgtgggggatgccgcagacggtgataaagaagttggt
ggggatggctacaccgatagtggcacttctgacgtcgatgggcctgatggcaagaccgat
ccggtcgataacggcaccgatccgagcaccgagggtgcaaaagtcgatacccaaccgcca
acgattgattcgcaacctgggatcgagttaaccggtgatcgcgatgtacccgccgatacc
gtgattgccacggtgagtgacgacacgactgatccgaaggatctcacagtcgaagtcacc
ggcctgcccaagggggtcgatttcactgtcgacgaggaaaccggcgagatcaaactcgcc
ggcaagccagctgatgtggaggaatccaccgactatacggtcacgatcaaggtgacggat
aaggctggaaacactactgaaaaaacggtcaaagtcactgtaaacccgaagtcttcggat
actcgggattatgaacccccgaccatcacggacgtcaccgatgtctcagtcaccgcaggg
agctccatcggcgacgatgctgtcattgccacagtaggcgacgatgtcaccgccaacgac
aagttacaggtcactgtgcaagggttacccgatggtgtgggctttaaggttcatccagaa
accggtgcagtatccctctacggaacaccaaccggattaaaggagaccacggactacaaa
gtaacgattacggttactgacgaagctggtaacagcaacgaggcaactgcaacagttacg
gtgaacgtcacaaagcagctcaatgacagcaacgaaccgacggctcaaaaaatcgaggtt
cctgttggtggcaccccggaggcaaaagatggcatagccaactttactgagcttcccgaa
ggtacgacggcgcaattcgccaagccggtagacacctcggaggctggtgaattcagcgcc
gaagtcatcgtgacatacccggatggctcgaaggatcacattgtcgtcccggtgtcggtt
gtcgcagacaaaattgctccgacaatttctgagaccaacaatgtcacgctagccggcggc
cagccggttcctgaaggaacggtaatcggcaaggtcagtgacgatgtcacaagcatcgct
gatcttgacgtcaccattgaaggtctgcccagtgaggtaacggcgacggttgatccgcaa
accggtgagattaaactcaccggcaagtcagctgatgtggaggaatccaccgactatacg
gtcacgatcacggtgacggacaaggctggcaacaccacgaccagtgacgttaccgtcacc
gttacccctgtcacggatgctgacaagtatgcgcctactggaaaaaccatcgccactgag
ctcgggggaagccctgatgccgcgagcggtatcggcaacagtgacgagctgcccgacggt
acatccttcgatttcgcaacaccggttgatactgattccccgggaaccaaggatgcgatc
attgtggtgacctaccctgacggcaccgaggacgaggttccggtgaaggtcgtagtcatc
gacccggcagcggatcttgatgatgatggcataccgaatgccaaagatcctgacatcgac
ggtgacggggtaaacaatgccgatgagatcgcagcagacctcgacccgacaaatccggat
accgatggcgatggccagactgacggtgaagaagacactgatcacgatggtaaaaccaat
accgaagagtccgaggtgccacagaatccggacggttctgatatagaagtcactgatgaa
aacaatgacggtatgggggatgttgatgtcaccgatactgatccggaagatggcgtgcca
gatatcatcgacaacttaggtcccgatggtgatattgatggtgacgggattccgaactcg
caggatcccgacattgatggcgacggggtgaacaactccgatgagaaagaagcgggtctt
gacccgtttaacccggacaccgatggtgacggcacccgtgatggtgatgaagacgccgac
ggtgacggtaagaagaactctgatgagtcgttcgtgccggaggatccggaaactggtaag
gatctgccggtaacgaacaccgatggtgacggtattgctgatcctggcgtcactgatcgt
gacaacgatggcaagccggatatcactgatccgaacgacacggtcgataccaccggtgac
ggtgatattgatggtgacgggattccgaactcgcaggatccggatattgatggtgacggg
gtgaataactccgatgagcaggctgcgggtcttgatccgtatgatccgaccacgaatgat
cgggaaactggtcagccttctgatgatggtaagaaagacgctgacggtgacgacaagtcc
aatgccgaggagtcgttcgtgccgaagggcgaggatggtgaggatctgccggtaacggac
actgatggtgacgggatggctgatccaggtgtcactgatcgtgacaacgatggcaatccg
gatatcactgatctgaacgacacggttgataccaccggtgacggtgatattgatggtgac
gggattccgaactcgcaggatcccgacattgatggtgacggggtgaataactccgatgag
caggctgcgggtcttgatccttatgatccgaccacgaatgatcgggaaactggtcagcct
tctgatgatggcaagaaagacaccgacggtgacggaattgacaacgctaccgagtccgag
gtcaagcaggacgatactggcaaggacattcctgttaccgataccgatggtgatggcatg
ggtgatccagggatcaccgataaggatggcaatggtgtctctgatgtggtgcaagctcag
gtccactacggtctgatcgcggtagcccgtccagctacgggggcgaacacctcagcaaag
aacgtgctggttgtcgagaagaagtcagttactcgggcactgcctgaaacggtgtctaat
gtggtcatcgatccgtcgtggaccgcgccacaaggggttactgccacggtggacgctgat
ggcgacgtggtgttgactgtgaccaacgatgctgatctttacgatgaggccgcaccgctg
caggtaccggtgatcgtcaccttcacgtatggtcgtgtttcgaatgtcacggcagacttc
atcatctacgatgcggcagctgttgcaccggagggtgatcttgatggtgacggtattccg
aatgcgcaggatccggatattgatggcgatggggtgaataactccgatgagatcgcagct
ggtttagatccgttcgataaggacaccggtaacaccgggaagaccgatggtgacaaggat
aatgacgaagatggcctgaacaacgattcggaatcgtatgttcctgccggatctgttgaa
gatatagacggtgacgggatcgctgatccagggatcaccgatcaaaacggcaacggtatc
gcagatctcgttgataaggattcggtgaaggcgattgctgacggggaaccggaagaagat
ggtggcctttcctccaagatcaagggatcgctgggttctgctggtggttcgtccgccggt
tcgattctgccggtcgtgctcggattgggtgccctggctgggatcattggcctgattgcc
aacaatcctgatttggtggccatggtcaatggccagttcttgcctggtgcaccagcaccc
gcggtggaacctgctccggctcctgcacctgctgatcaggtaccaggtccgtctaagggg
cttgtcaagcagcctgctcgtgacggtgcgtcgaatgctgtgctcgcggtcactggtgcc
aacgtcacaggtgttggtgtggccggtctgctggcgatggtgctgggtggtctgttggtc
ttcgcccggaagcgccgcaacagctaa
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