KEGG   Corynebacterium choanae: CCHOA_11545
Entry
CCHOA_11545       CDS       T06925                                 
Symbol
nei2
Name
(GenBank) Endonuclease 8 1
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ccho  Corynebacterium choanae
Pathway
ccho03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ccho00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    CCHOA_11545 (nei2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccho03400]
    CCHOA_11545 (nei2)
Enzymes [BR:ccho01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     CCHOA_11545 (nei2)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     CCHOA_11545 (nei2)
DNA repair and recombination proteins [BR:ccho03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     CCHOA_11545 (nei2)
SSDB
Motif
Pfam: H2TH Fapy_DNA_glyco zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AZA14680
UniProt: A0A3G6JDD8
LinkDB
Position
2896557..2897594
AA seq 345 aa
MQTGNNNHASRWVSPEHGCCRGSRSSDTRLTHLVRQQHRTGVARRDNPTTSICTRNIQVV
CGGNYSQPLPADYIEPMPEGHVLHRLAGELNRRFAGKVLEISSPQGRFQAEANLLQGVPF
DHAEAYGKQLFLHFATPQPERIIFIHLGLIGKFRFYEHTPPAGIIRLQLVSDDTYAVLTG
PQWCRLIDEPTREQAIRKLGADPLRASSDPGAIWPRIKRSSRPFGELLMDQSLFAGVGNI
YRAEVLFRAGIAPKRKGKRILRREFDAVYADLVELMALGVRDGRIDTVRPAHLPEAMGRP
PRDDAHGGEVYVYRRAGEPCYVCGTPIRHEIMGNRNLFYCPTCQH
NT seq 1038 nt   +upstreamnt  +downstreamnt
gtgcaaactggcaacaacaatcacgcgagccggtgggtctcgccggaacacggttgttgc
cgtggcagccgcagcagcgacacccgtcttacacacctggtgcggcagcagcaccgcacc
ggggtggcgaggagggataaccccaccacaagtatttgcacacgcaacattcaagtggtt
tgcggcggcaattattcccaacccttaccagcggactacattgaacccatgcctgaaggt
cacgtattgcatcgtcttgctggtgagctcaaccgtcgcttcgccggaaaagtattggag
atttcttccccgcaaggccgcttccaggcggaagctaacctcctgcaaggggtgcccttc
gaccatgctgaagcctacggcaaacaactgtttttacattttgcaaccccccaaccggaa
cgcatcatcttcattcatcttgggctcatcgggaagtttcgtttctatgaacacacccca
cccgccgggatcattcgcctgcagctggtctctgacgacacctatgcagtgttaaccggg
ccgcaatggtgtcgactcattgacgaacccacccgggagcaggccatccgcaaactgggg
gcggatccgctgcgtgccagttccgatccgggagcaatctggccgcgaataaaacgatcc
agccgccccttcggggaactgctcatggatcagtcgctctttgccggggtgggcaatatt
tatcgtgccgaagtgttatttcgcgccggtattgccccgaaacgtaaagggaaacggatt
ctgcgccgcgaattcgatgcagtctatgccgatttggtggaacttatggctcttggggtg
cgcgatggtcgcattgatactgttcgccctgcgcatcttcccgaagcgatggggcgccca
ccccgtgacgatgcgcatggtggggaagtgtatgtctatcgtcgcgccggtgaaccctgc
tatgtgtgtggcaccccgattcgccacgaaatcatgggcaaccgcaacctgttttactgc
ccaacctgtcagcattaa

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