Corynebacterium choanae: CCHOA_11640
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Entry
CCHOA_11640 CDS
T06925
Symbol
phr
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ccho
Corynebacterium choanae
Brite
KEGG Orthology (KO) [BR:
ccho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccho03400
]
CCHOA_11640 (phr)
Enzymes [BR:
ccho01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CCHOA_11640 (phr)
DNA repair and recombination proteins [BR:
ccho03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CCHOA_11640 (phr)
Prokaryotic type
CCHOA_11640 (phr)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AZA14699
UniProt:
A0A3G6J9X0
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All DBs
Position
complement(2923345..2925318)
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AA seq
657 aa
AA seq
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MADHNQPHVLLWYRDDLRIADHGPLAYAYDMAPARISALYCYEEADPATGRTLLPLPRAM
GAACRWWLRQSLHAHAKALADRNITLYILRGDPAQQIPQFCQEHQVTHVAWQRRYMPHAP
TLDRWIKEHLTTAGMSVQSFPGFTLHEPWEITKADGGSFQVYTPYSKAALRQLDDCGVAH
HVLREAAAFPPFTSSSQPRDTVDRENVHAAIEALGLPGTGEEIPGIPQTIAARGHAAGAD
PETVLHHAAAPQSAAISTNDAAACAAPAACDAPDAGKRTAAPTQQSPLPHFPQIAVPHPF
ALHQDSWWRYFGSYHTPGEHGAQQRLERFLARQAAMRDYAAQRDVPSQPATSELSPHLRF
GEISPARIVAETTSRADADELVGSGWAATFFKELLWRDFAWSRLWQHPTMADAPVREKFS
SFPWTWMPAVEQPHTAFAASREAITTAITLPNVYAAGGVSPRQQLMIELGRWQAGLTGVP
LVDAGMRQLWLFGTMHNRIRMVVGSWLTKNLLIDWRHGERWFWETLVDADHAANPFNWQW
VAGCGDDAAPYFRIFNPLTQAAKFDASGAYQQYFLPDAAQCTGQTAVQRAAQSAADELPL
SFPDSDPVSDGNPVAHPRSEQPANAAVAAPCYPATPMVAVGESRKQALAAYETIKGL
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccacaaccaaccccatgtgctgctgtggtaccgcgatgatctgcggatagct
gatcacggtcctcttgcgtatgcctatgacatggcaccggcacggatctctgcgttgtac
tgctatgaggaagcagatccggcaacagggagaacattgttgccactgccccgggcaatg
ggggctgcctgccgctggtggttgcggcaaagcctgcatgcacacgctaaagcactcgct
gatcggaatatcaccctctacattctgcggggtgatccagcccagcagattccccagttt
tgccaggaacaccaggtaacccatgtcgcctggcagcgccgctacatgccgcatgcgcca
acgcttgaccggtggataaaagagcatctcaccactgccgggatgagcgtgcaatccttt
cccgggtttacgctgcacgagccgtgggaaatcaccaaagccgacggcggcagttttcag
gtctacaccccatattccaaggcggcgttgcggcaattagacgactgtggggtggcgcat
catgtgctgcgggaggcagccgcgtttccaccatttactagcagttcccaaccccgggac
acggtggaccgggaaaacgtccacgcggctattgaagcgcttggtttgcccggaacaggc
gaagagatccctgggattccgcaaacaattgcagcccgagggcatgctgctggtgccgac
ccggagacagtgttgcaccatgctgctgcaccgcagagtgctgctataagtacgaacgat
gctgctgcatgtgctgcacctgctgcatgtgatgcacccgatgcaggaaagcgcaccgct
gctccgacgcaacagtcaccgctaccgcattttccgcagattgctgtgccacatccgttt
gcgctgcaccaggacagctggtggcgctactttggctcctatcacacccccggcgaacac
ggggcacagcagcgacttgagcgcttccttgctcggcaggctgcgatgcgggactatgcc
gcgcaacgcgatgtgccaagtcaacctgcaacaagtgaattgtcaccgcatttacgcttc
ggggagatcagccctgcccgtatcgttgcggaaaccactagccgtgctgatgcggatgaa
ctcgtcggcagtggttgggcggcaacctttttcaaggaactgttgtggcgtgattttgct
tggtcgcgcctgtggcaacatccaacgatggctgatgcaccagtccgggagaaattttcc
tccttcccgtggacgtggatgcctgcagtggaacagccgcacaccgcgtttgctgcctcc
cgggaagcgatcaccaccgccattacattgcccaatgtgtatgcggccgggggtgttagc
ccccgccagcagttgatgattgaacttggccgttggcaggctggtctgaccggtgtgcca
ctcgttgatgcaggtatgcgacagttgtggctgtttggcaccatgcacaaccggattcgc
atggtagtgggaagctggttgacgaaaaatttactcatcgactggcggcacggggaacgc
tggttctgggagacgctggtggatgctgatcatgctgccaacccgtttaactggcagtgg
gttgctgggtgtggcgacgatgccgcaccctattttcggatttttaatcccctcacccaa
gccgcaaagtttgatgcttccggtgcctatcagcagtatttcctgcccgacgcagcgcaa
tgcacagggcaaactgcagtgcaaagggccgcacagagcgcagcggatgagcttccgttg
agttttccggacagtgacccggtatctgatggcaacccggtggcgcacccaagaagcgag
caacctgccaacgcggctgttgccgccccgtgctatccggccaccccaatggttgctgtg
ggtgaatcccgcaaacaggcacttgccgcctatgaaactatcaaagggctgtaa
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