Candidiatus Paracoxiella cheracis: ACJMKR_00090
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Entry
ACJMKR_00090 CDS
T10945
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cchr Candidiatus Paracoxiella cheracis
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchr03021
]
ACJMKR_00090 (rpoH)
Transcription machinery [BR:
cchr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACJMKR_00090 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
HTH_25
2Fe-2S_thioredx
WHD_MCM8
LysM3_NFP
HTH_71
HTH_11
Motif
Other DBs
NCBI-ProteinID:
XQW91030
LinkDB
All DBs
Position
19769..20641
Genome browser
AA seq
290 aa
AA seq
DB search
MSTYLSCIGEKSLSVGSLGSYINWVNQVPLLSLEEEQELAQRLKQHNDLEAARKLVMSHL
RFVVKIARGYSGYGLQQADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWIRAEIHEFVL
RNWRIVKIATTKAQRKLFFNLRKHAKKRGWFSNDEVKAVAEQLNVSHKDVRQMEARLNNY
DESFDGSNDGDSGESGSSWTTAPAHYLEDKRNQNPATLLEKSDWSNDQETRLYRALQTLD
DRSQDILQQRWLNKEKSTLHELAEKYKVSAERIRQLEQNAMNKMREAMGT
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctatttatcatgcattggtgaaaaatcgctatccgtaggtagcctcggttct
tatatcaactgggtcaaccaggtcccactgctatcgctggaagaagagcaagaacttgct
caacgcctaaagcagcacaatgatctagaggccgcccgaaagctcgtcatgtctcacctg
agatttgtcgtgaaaatcgctcgtgggtactccggttacggacttcagcaagctgacctc
atccaagaaggcaatatcggtttgatgaaagccgtcaaacgctttgatccaaacgtaggt
gttcgtctcgtatctttcgcggttcattggattcgcgctgaaatccatgaattcgtttta
cgaaattggcgtattgtaaaaattgcaacaaccaaggcgcagcgaaagcttttctttaac
ttacgcaaacacgctaaaaagcgtggttggttcagcaacgacgaagtcaaagccgttgcc
gaacaattaaatgtaagccataaagacgttcgccaaatggaggcgcgtctcaataattat
gacgaatctttcgatggtagcaatgatggtgacagtggcgaatcaggctcatcctggacg
actgctcccgcgcactatttggaagacaagcgtaaccaaaaccctgcaactctattagaa
aagagcgactggtctaacgatcaggaaactcgtttgtatcgtgcgctacaaacattggac
gaccgtagccaagatattttgcagcagcgttggttaaataaagaaaaatcgactttgcac
gagttagctgaaaaatacaaagtttctgctgaacgcattcgacagcttgaacaaaatgct
atgaataaaatgcgcgaagcaatgggaacataa
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