Candidiatus Paracoxiella cheracis: ACJMKR_00815
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Entry
ACJMKR_00815 CDS
T10945
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cchr Candidiatus Paracoxiella cheracis
Pathway
cchr03030
DNA replication
cchr03410
Base excision repair
cchr03420
Nucleotide excision repair
cchr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACJMKR_00815 (polA)
03410 Base excision repair
ACJMKR_00815 (polA)
03420 Nucleotide excision repair
ACJMKR_00815 (polA)
03440 Homologous recombination
ACJMKR_00815 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cchr03032
]
ACJMKR_00815 (polA)
03400 DNA repair and recombination proteins [BR:
cchr03400
]
ACJMKR_00815 (polA)
Enzymes [BR:
cchr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACJMKR_00815 (polA)
DNA replication proteins [BR:
cchr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACJMKR_00815 (polA)
DNA repair and recombination proteins [BR:
cchr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACJMKR_00815 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJMKR_00815 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_2
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
XQW91160
LinkDB
All DBs
Position
163805..166492
Genome browser
AA seq
895 aa
AA seq
DB search
MSETQKPFILVDGSSYLFRAYYALPPLTNSKGQPTGAIYGVINMLRKLMMDYEPEHIAVV
FDPKGKTFRNELYAEYKANRTEMPDELRDQIKPLFEIIKALGLPLIIKEGVEADDVIATL
AKKAKQEGMNVLVSTGDKDLAQIVNHKVTLINTMTNRMLDPEGVVEKFGVPPESIIDYLT
LVGDTSDNIPGVPKVGPKTAAKWLNQYGSLDNIIKNADEIKGKVGENLRAHISEIPLTRE
LVTVLSDVKLDEKLMELSPREQDREKLIALFSELEFKTWLAEVLSTEKAASKEECRYDTI
LDKKSFEKWLKKLSHANLFAFDTETTDIDAMRATLVGVSFAVKPGEAAYVPLAHDYLGAP
KQLDKKWVLQQLKLLLENPAKTVVGQNLKYDIQVLAKENIAIKAKIWDTLLESYVLNSSS
TRHNLNSLSLKYLGKSTIQFEDIAGKGAKQMSFNEISIDEAAPYAAEDADITWQLHQKLM
PMIENEKNFVKVLNQIEMPLMPVLARMEMHGVLIDADMLKKHSKELEKRIKELEKEAFTL
AGHEFNLGSPKQLQTILYDEQKLPVLKKTPGGQPSTAEFVLQDLALDYPLPKVILEYRSL
SKLKSTYTDRLPEQIHSDTGRVHTSYNQAVTSTGRLSSNNPNLQNIPIRTEQGRRIRQAF
IAPRGYRIVAADYSQVELRIMAHISKDPALIKAFEEELDVHRATAAEVFGVKLDEVTNDQ
RRSAKAINFGLLYGMSSFGLARQLGIERGLAKKYIDIYFNRYPKVHEYMEVIRKLASEQG
YVETLFGRRLYVPEINSANMQRRRAAERAAINAPMQGTAADIIKIAMIKVDDWLQNNKVD
ARMIMQVHDELVFEVATKDLERVNKQICESMEKAAQLVVPLVVDMGVGQNWDEAH
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacccaaaaaccattcattctcgttgatggctcttcatatttgtttagagcc
tactacgccctaccgccgttgactaactcaaaaggtcaaccaacgggtgcgatctatggc
gttatcaacatgcttcgaaaattgatgatggactacgaaccagagcatattgcggtggtg
tttgacccaaaaggtaagacgtttcgcaatgagctttatgccgagtacaaggcaaatcgt
acggaaatgccagatgaattgcgcgatcaaataaagccattatttgaaataatcaaagcg
ctaggcttgccgttgattattaaagagggtgttgaggcagatgatgtcattgcaacactt
gcgaaaaaagcaaaacaagaaggtatgaacgtattggtgtcgacgggtgataaggacttg
gcacaaattgtaaatcacaaggtcacgttaattaacaccatgacaaatcggatgctcgat
cctgaaggggttgttgaaaaatttggtgtaccgccagaaagcatcatcgattacttaacg
ttggtgggtgatacatcggacaatattccgggtgtgccgaaagtcggccccaaaacggcg
gcgaagtggttaaatcaatatggttcacttgataatattataaaaaatgccgatgaaatt
aagggtaaagtcggtgaaaatttgcgagcgcatatcagtgaaattcccttaacacgggaa
ttagtcaccgtactttctgatgtgaagctcgatgaaaaactcatggaactatcaccacgc
gaacaagatcgtgaaaaactaatcgcgttattttctgagttggaatttaaaacctggctg
gctgaagtgttgtcgactgaaaaagcagctagcaaagaagagtgtcgctacgacacgatt
ctcgataaaaaatcgtttgagaaatggctaaagaaattatctcatgctaatttatttgct
tttgatactgaaactacggatatcgatgcgatgcgcgccacattggttggtgtatcgttt
gccgtaaaacccggtgaggcggcctacgtgccattagctcatgattatttgggtgcgcca
aagcagcttgataaaaaatgggtgttacaacaactaaagttattattagaaaacccggca
aaaaccgttgtgggtcaaaatttaaaatacgatatacaagtgttagcaaaagaaaatatt
gcgattaaagctaaaatttgggatacgttgttggaatcttacgtattaaatagttcgagt
acacggcataatttaaatagcctctcgttaaaatatttgggcaaaagcaccatacagttt
gaagatatcgccggaaaaggcgctaaacaaatgtcatttaatgagatttcaatcgatgaa
gctgcgccttacgcagccgaagacgccgatattacatggcagttgcatcagaaattgatg
ccgatgattgaaaatgaaaagaactttgtaaaagttttaaatcaaattgaaatgccgttg
atgccggtattggctcgcatggagatgcacggcgttttgatcgacgctgatatgctcaaa
aagcacagcaaggagctcgaaaaacgcattaaagaactggaaaaagaggcgtttacatta
gcgggtcatgaatttaatttgggctcaccaaagcaactacaaaccattttatatgatgaa
caaaaactaccggttctaaagaaaacaccgggtggacagccctcaacggctgaatttgtg
ttgcaagatttggcgcttgattatccattgcctaaagttattttagaatatcgtagtttg
agcaaattaaaatccacgtatactgatcgtctaccggaacaaatacattcggatacgggg
cgcgtgcacacttcttataatcaagcggtcacatccacgggtcgattgtcatcaaataat
ccgaacttgcaaaatattccgattcgaacagagcaagggcgcagaattcgccaagcgttt
attgcaccacgtggctatcggattgttgcagccgattattcacaggtggaattgcgtatc
atggcgcatatttcaaaagatcctgcattaataaaagcatttgaggaagagctggatgtt
catcgcgcgacggcagcggaagttttcggtgtgaaactcgatgaggtgacgaatgatcag
cgtcgcagtgccaaagcaattaattttggattgctctatggcatgtcgagttttggctta
gcgcgacaattaggaattgagcgtggtttggcgaaaaaatatatcgacatttatttcaac
cgttatccaaaagtgcatgaatacatggaagtgattcgaaagcttgcctcagaacaaggt
tatgtggaaacattatttggtcgccgcttgtatgtgcctgaaattaattctgcgaatatg
cagcgacgccgtgcagcagagcgtgcagcgattaacgcgccgatgcaaggaacggcggca
gatattattaagatcgcaatgattaaggtagatgactggcttcagaacaataaagtcgat
gcgcggatgattatgcaggtgcacgacgaattggtttttgaagtggccaccaaagatctt
gagcgagtgaataaacaaatttgcgagtcaatggaaaaagctgcccaattggttgtcccg
ttggtcgttgatatgggtgttggacagaattgggatgaagcacattaa
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