Candidiatus Paracoxiella cheracis: ACJMKR_05195
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Entry
ACJMKR_05195 CDS
T10945
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
cchr Candidiatus Paracoxiella cheracis
Pathway
cchr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACJMKR_05195 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchr03019
]
ACJMKR_05195 (orn)
03009 Ribosome biogenesis [BR:
cchr03009
]
ACJMKR_05195 (orn)
Messenger RNA biogenesis [BR:
cchr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACJMKR_05195 (orn)
Ribosome biogenesis [BR:
cchr03009
]
Eukaryotic type
Pre-60S particles
RNases
ACJMKR_05195 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XQW91926
LinkDB
All DBs
Position
complement(990222..990767)
Genome browser
AA seq
181 aa
AA seq
DB search
MPLSETNLIWLDLEMTGLNPDKDHIIEIATIVTNSNLDILEEGPVFAIHQSAELLDGMDS
WNTEHHTASGLVDRVKESKITEADAEKATIEFLEKLVPPGKSPMCGNSICQDRRFLWRYM
PQLEKYFHYRNLDVSTLKILVQDWAPQIGAQLTKESRHLALQDVRDSIEELRFYREHFIK
S
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcccctatccgaaacaaatttaatatggctcgatttagaaatgactggcctgaacccc
gataaagatcacattatcgagatcgctacaatcgttacgaactcaaatctcgatatactc
gaagaaggtcccgtatttgcgattcatcaatccgctgagttgctcgacggcatggattcc
tggaacaccgaacatcacaccgcttccggtctcgtcgatcgcgtcaaagaaagcaaaata
acagaagccgacgccgaaaaggcaacgattgaatttttagaaaaactagttccaccagga
aaatctccaatgtgtggcaactccatttgccaagatcgccgttttctctggcgctatatg
ccgcaattagaaaaatattttcactatcgcaatttagacgtaagcacccttaaaattctt
gttcaagattgggcaccccaaattggtgcgcaactcactaaagaatcaagacatcttgcg
ctgcaagatgttcgtgactcgatcgaagaattacgattttatcgcgagcattttattaag
agttaa
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