Candidiatus Paracoxiella cheracis: ACJMKR_07205
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Entry
ACJMKR_07205 CDS
T10945
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cchr Candidiatus Paracoxiella cheracis
Pathway
cchr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACJMKR_07205 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchr03019
]
ACJMKR_07205 (pnp)
03016 Transfer RNA biogenesis [BR:
cchr03016
]
ACJMKR_07205 (pnp)
Enzymes [BR:
cchr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACJMKR_07205 (pnp)
Messenger RNA biogenesis [BR:
cchr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACJMKR_07205 (pnp)
Transfer RNA biogenesis [BR:
cchr03016
]
Prokaryotic type
tRNA degradation factors
ACJMKR_07205 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
IF3_N
Spt6_S1
DUF3016
Motif
Other DBs
NCBI-ProteinID:
XQW90215
LinkDB
All DBs
Position
complement(1380072..1382153)
Genome browser
AA seq
693 aa
AA seq
DB search
MNKIVKTFQYGKHTVTLETGEIARQASGSVIIRMGDTMLLVTAVAQKDTEEGRDFFPLTV
NYQEKTYAAGKIPGGYFKREGRPTEKETLTSRLIDRPLRPVFPNGFTNEVQVIATVLSMD
PEVPTDIPAIIGASAAICLSGMPFNGPIAGARVAYLNGQYLLNPSLKEIEESQLDLVVAG
TKDAVLMVESEAHELTEAVMLGAVLYGHEQMQVAIRAIEELVEEAGTQTWDWQAPEENTA
LKQQIADKASSDVAEAYKIREKQARQTRIQEIRNQLISDLCTDDENSPNEIEVANLFHDL
EKDLVRQQILSGQPRIDGRDTETVRPITARVGVLPRAHGSALFTRGETQALAVATLGTEG
DAQMIDDLDGDRRDEFMLHYNFPPFCVGEVGFMSGPKRREIGHGRLAKRAVASVVPKGEA
FPYVIRVVSEIMESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLIKEAEKYAVLTD
ILGDEDHLGDMDFKVAGTASGVTALQMDIKIEGITKEIMERALDQAKRARMHILEIMSQV
INQPRDHVSQHAPRIITIKINPDKIRDVIGKGGATIRELTEATNSTIDISDDGVVTIAAV
RGEDGEEAKRRVEALTADVEVGKTYEGPVVKIMDFGAFVSVLPGRQGLVHISQIADEHVD
NVHDYLQEGQTVRVKVIEIDRQGRVRLSMKQAE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaattgttaagacttttcaatacggtaaacatacagttacattagaaacgggc
gaaattgcccgacaagcctccggctctgtgataatccgcatgggagacaccatgcttttg
gtcacggccgttgcccaaaaagatacagaagaagggcgggatttttttcccctgactgtt
aattatcaagaaaaaacctatgccgcaggaaaaattcctggtggctattttaaacgtgaa
gggcgcccgacagaaaaagagacgttgacctcgcgattaattgatcgacccttgcgtcca
gtatttccaaatggatttaccaacgaagtacaagtgattgcaacagtgttatcgatggat
cctgaagttccaaccgatatccccgccattattggggcctcagcagctatttgtttatcg
ggtatgccatttaatggcccgattgcaggtgctcgggttgcctatcttaatggtcaatat
ctgttaaacccatcgctaaaagaaatagaagaatcgcaattagatttagtcgttgccgga
acaaaagatgcggttttaatggttgaatctgaagcacacgaattaacagaagctgttatg
ttgggtgctgtgctttatggtcacgaacaaatgcaagtcgcgatccgtgccattgaagaa
ttagtggaagaagcaggcacgcagacttgggattggcaagcacctgaagaaaatacggcc
ttaaaacagcagatcgccgataaagcgtcgagcgatgtggcagaggcttataaaattcgt
gaaaaacaagcacgacaaacgcgcattcaagaaattcgcaatcagttaatttcggattta
tgtactgacgatgaaaatagtccgaacgaaattgaagtcgcgaatttattccatgattta
gaaaaagatttagtgcgtcagcaaattttgtctggccagccgcgtatcgatggtcgagat
accgaaacggtaagacccattactgcgcgagtaggcgtgttgccacgtgcacacggttca
gcattatttacgcgtggtgaaactcaagcattagctgttgctactttgggtacagaaggc
gatgcgcaaatgatcgatgacttagacggtgatcggcgcgatgaattcatgttgcattac
aacttcccacctttctgtgtgggcgaagttggatttatgagtggaccaaagcgtcgtgag
attggtcacggtcgtttggcaaaacgtgcggttgcatctgttgtgccgaagggtgaggca
ttcccttacgtcattcgtgtcgtatctgaaattatggaatccaacggttcgagctccatg
gcgagtgtttgtggcagcagtttagcattgatggatgcaggcgtgccgattaaagcaccg
gttgccggtattgcgatgggcttaattaaagaagccgaaaaatatgcagtattgactgac
attttaggtgatgaagatcacttgggggatatggatttcaaagtagccggtacggccagt
ggtgtgacggccttacaaatggatattaaaatcgaaggcattaccaaagaaattatggag
cgagccttagatcaagctaagcgtgctcgtatgcatatattagaaatcatgagccaggtg
attaaccaaccgcgtgatcacgtatctcagcatgcgcctcgtattattacgattaaaatc
aatccggataaaattcgtgatgtgattggtaagggtggtgcaaccattcgtgaattaacg
gaagcaactaactcgacaatcgacatttccgatgatggcgtcgtaacgattgccgctgtg
cgtggtgaagatggtgaagaagctaaacgccgcgtagaagccttaacggcagacgttgag
gtgggtaaaacttacgaaggtccggttgtgaagatcatggatttcggtgcgtttgtgtca
gtattgccaggccgacaagggttggtgcatatttcgcaaattgccgatgagcatgttgat
aatgttcatgattatctgcaagaaggtcaaactgttcgcgttaaggtcattgaaatcgac
cgccaaggaagagtacgtttgagcatgaagcaagcggaataa
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