Candidiatus Paracoxiella cheracis: ACJMKR_08860
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Entry
ACJMKR_08860 CDS
T10945
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cchr Candidiatus Paracoxiella cheracis
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cchr03016
]
ACJMKR_08860 (truB)
Enzymes [BR:
cchr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACJMKR_08860 (truB)
Transfer RNA biogenesis [BR:
cchr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACJMKR_08860 (truB)
Prokaryotic type
ACJMKR_08860 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
XQW90499
LinkDB
All DBs
Position
complement(1685131..1686045)
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AA seq
304 aa
AA seq
DB search
MSQTANKKVKRSVNGVLLLDKPTGITSNRALQLVKRLFYAKKAGHTGSLDPLASGMLPIC
FGEATKFSQYLLDADKSYYVKAKLGIRTATADEEGDVIAKRDVPSLTQAQIDSAFDAFRG
EIEQVPSMFSAVKHKGQPLYKLARQGIEIERKSRQIKIYELNVLDYSNNIVTFEVRCSKG
TYVRTLVDDFGESLGCGAHVIQLRRLTVGHFHMDQMISMETLEKTDEQTLMNYLLPLEST
VANWPAIELERHTAFYLKQGQAVMVPKAPTQGWLRLLQKDGRFIGVGEILCDGKVAPRRL
ITDF
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagaccgcaaataaaaaagtgaaacgaagtgtcaatggtgttttgctgctagat
aaaccaacgggtattacgtctaatagagcactgcagctagtaaaacgattgttttatgct
aaaaaagcagggcatacgggcagtctagatccgttagccagtggtatgttgcccatttgt
tttggcgaggcaacaaaattttcgcaatatttgttggatgctgacaaaagttactatgtc
aaagcaaaattaggtattcgcacagcaacagcggacgaggagggtgacgttattgcgaaa
cgcgatgtaccctcattaactcaagcgcaaattgactcagctttcgatgcttttcgtggt
gagattgagcaagtgccatcgatgttttcagcagttaagcataaaggtcaacccttatat
aaattagcgcgtcaaggtattgagattgagcgaaaaagtcgtcagattaaaatttatgaa
ttaaatgtattggattacagcaataatattgtcacctttgaagtgcgttgtagtaaaggc
acatacgtccgtactttagttgatgattttggtgaaagcttgggatgtggcgcgcatgtt
attcaactgcgacgcttaacggtcggtcattttcacatggatcagatgatttcaatggaa
acgcttgaaaaaacggatgagcaaaccttaatgaattatttattgccacttgaatctacc
gtggcgaattggcctgcgattgagttagaaagacatactgccttttacttgaaacaaggc
caagcggtcatggttccaaaagctcctacacaaggttggttgcgactcttacaaaaagat
ggtcgattcattggggtcggcgaaatactgtgtgatggtaaggttgctccccgccgttta
attactgatttttga
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