Candidiatus Paracoxiella cheracis: ACJMKR_10100
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Entry
ACJMKR_10100 CDS
T10945
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cchr Candidiatus Paracoxiella cheracis
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cchr03032
]
ACJMKR_10100
03036 Chromosome and associated proteins [BR:
cchr03036
]
ACJMKR_10100
03400 DNA repair and recombination proteins [BR:
cchr03400
]
ACJMKR_10100
DNA replication proteins [BR:
cchr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ACJMKR_10100
Chromosome and associated proteins [BR:
cchr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ACJMKR_10100
DNA repair and recombination proteins [BR:
cchr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ACJMKR_10100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
XQW90717
LinkDB
All DBs
Position
complement(1916025..1916363)
Genome browser
AA seq
112 aa
AA seq
DB search
MVKSELINRIAGRQENLSLKDVELSVNHILERMSNSLGSGDRIEIRGFGSFSLHYRPPRK
AHNPKTGDRVFTSAKYTPHFKPGKDLRERVNNNRMTHEIRESNFVEEALEEQ
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggttaagtcagagttgatcaatcgaattgcgggccgccaagagaatttatctcttaaa
gatgttgagctcagcgtaaatcacattcttgaacgaatgagcaacagtcttggtagtggt
gatcgaattgaaatacgtgggtttggtagtttctctttgcactatcgtccaccacgaaaa
gcacacaatccaaaaacgggtgatcgtgtttttacaagcgcaaaatatacaccgcacttc
aaacctggaaaagatttacgcgaacgcgtgaacaacaaccgaatgactcacgaaattcgt
gaaagcaattttgttgaagaggcgcttgaagagcaataa
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