Candidiatus Paracoxiella cheracis: ACJMKR_11245
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Entry
ACJMKR_11245 CDS
T10945
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
cchr Candidiatus Paracoxiella cheracis
Pathway
cchr00300
Lysine biosynthesis
cchr00470
D-Amino acid metabolism
cchr01100
Metabolic pathways
cchr01110
Biosynthesis of secondary metabolites
cchr01120
Microbial metabolism in diverse environments
cchr01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACJMKR_11245 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACJMKR_11245 (dapF)
Enzymes [BR:
cchr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACJMKR_11245 (dapF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XQW90916
LinkDB
All DBs
Position
complement(2133952..2134782)
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AA seq
276 aa
AA seq
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MKVRFTKMQGLGNDFAVINATKDPFQLTTSQIQKMANRRFGVGFDQLLVLESSGRNGVDF
NFRIFNADGSEVGQCGNGARCIARFIQEQNLSKASEFAISTLSDILHLKLENDDKVSVHM
GVPHFNPVDVPFVADKAANLYDVEVNNQLVKLGVVNIGNPHAIIPVDQIDAGLVSTLGAQ
LSTHDRFPEGTNVGFMQVINPQNIRLRVYERGTGETLACGSGACAAVAVGRRNGLLQERV
MVSQPGGSLSIHWQGPDTPILMTGPATTVFQGEWED
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacgatttacaaaaatgcagggattggggaatgactttgccgtcatcaatgca
acgaaggatccctttcagctcacgacatcccaaatccaaaaaatggctaaccgccgattt
ggggtcggttttgatcaattgttagtcttagaatcatcgggccgcaacggagtagacttt
aactttcgtatttttaacgctgatgggagcgaggtgggtcagtgcggtaacggggctcgg
tgtattgcgcgctttattcaagagcagaatctgagcaaggctagcgagtttgcgatatca
acgctgtctgacattcttcacctcaaattggaaaacgacgataaggtttcggtccatatg
ggggtgccgcatttcaatccagtggacgtcccatttgttgcggataaggctgcaaatttg
tatgacgttgaggtgaataatcaattagtcaaattgggtgtagtcaatatcggaaatccc
catgcgataattcccgtagatcagattgatgcaggtttagtttcgaccctaggtgcgcaa
ttaagcactcatgaccggtttccggaaggcaccaacgtgggcttcatgcaggtcatcaat
cctcagaatattcgcctgcgtgtctatgagcgcggtaccggagagactctggcgtgcggc
agtggtgcttgtgctgcggttgccgtgggtcgccgcaatggtttgcttcaagagcgtgtg
atggtgagccagccgggtggcagcctatccatccactggcaggggcccgatacacccatt
ctaatgaccggacccgcaacaaccgtattccaaggagagtgggaagattaa
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