Candidiatus Paracoxiella cheracis: ACJMKR_11585
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Entry
ACJMKR_11585 CDS
T10945
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cchr Candidiatus Paracoxiella cheracis
Pathway
cchr03420
Nucleotide excision repair
cchr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cchr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACJMKR_11585 (uvrD)
03430 Mismatch repair
ACJMKR_11585 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cchr03400
]
ACJMKR_11585 (uvrD)
Enzymes [BR:
cchr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACJMKR_11585 (uvrD)
DNA repair and recombination proteins [BR:
cchr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACJMKR_11585 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACJMKR_11585 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XQW90979
LinkDB
All DBs
Position
2201368..2203530
Genome browser
AA seq
720 aa
AA seq
DB search
MKNSPLLQSLNKPQQEAVSAPPSHMLVLAGAGSGKTRVLVHRIAWLIQHHHVSPHSILAV
TFTNKAAHEMRGRIESLLGMYLGNMWVGTFHGLSHRLLRAHWQEAELPETFQILDSEDQY
RLIRRIQRNLNLEEDKWPPKQSQWFINKQKEEGHRPDNVSNLEGSFFTETMIKIYKAYED
VCRRSGLVDFAELLLRSLELLQNNETIRAHYQDRFQHVLVDEFQDTNVIQYAWLRMFAGP
HNYVMAVGDDDQSIYSWRGAKIENIHRFSNDFSHSKTIRLEQNYRSTQTILTAANAVIDN
NTNRLGKKLWTDGDKGQPITLYAAFNERDESYYIVSCIKDYLQRGYKAKDVAVLYRSNAQ
SRILEERLIDSQIPYRIYGGQKFFERAEIKDALAYLRLIANRHDDAAFERIVNTPTRGIG
NNTLSSLRVTARENAASLWQTAEYLLEANTLNARATNALGNFIELINAVDRETKDMALGE
QTQAVLEQSGLIAHYKKDRSEKGLSRIENLEELVNATLQFKAENDLGLSPLASFLSHVAL
ETGEEQAEAHSDFVSLMTLHAAKGLEYPIVFISGMEEELFPHRMSMNEPNGLEEERRLCY
VGMTRAKEKLVLTYAECRYLHGIERFSQPSRFIHEIPDELIESIRPTPKLSRPTPVRPTA
KVEVAGQPGLRVGQRVQHKKFGAGVLINYEGQGEHARIQVKFDKAGTKWLVASFAKLTPL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattcaccactattacaatcattgaataaacctcaacaggaggcggtttcagca
ccgccaagtcatatgctagtgctcgctggcgccggcagtggtaaaacacgcgtgctcgtc
catcggatcgcatggcttattcaacatcatcatgtttcacctcacagtattttagcggta
acgttcacaaacaaagcggcccatgaaatgcgtgggcgcattgaatcattgcttggcatg
tatcttggcaatatgtgggttggcacatttcacggcttgtcacaccggttattgcgcgca
cattggcaggaagccgaattaccagaaacttttcagattttggactcagaagatcaatat
cgattgattcgtcgcattcaacgcaatttgaatctcgaagaagataaatggccacccaaa
caatcgcagtggtttattaataaacaaaaagaagaaggccaccgccctgacaatgtcagt
aatttagagggcagcttctttacagaaaccatgattaaaatttacaaagcctatgaagat
gtctgtcgtcgcagcggcttggtggattttgcagaattactcttgcgttccttagagctc
ttgcaaaataatgaaaccattcgtgcgcactatcaagatcgctttcaacacgtgttggtg
gatgagttccaagataccaatgtcattcaatatgcttggctgcgcatgtttgcgggccca
cacaattatgtcatggctgttggtgacgatgatcaatccatttatagttggcgcggcgct
aaaatagaaaacattcatcgtttcagcaatgattttagccattcaaaaactattcgcttg
gaacaaaactaccgctcaacgcaaacgattttaaccgcagccaacgccgtcatcgataac
aatacgaatcgtctgggcaaaaaattatggacggacggtgataaaggtcagcccatcacg
ttatatgcggcttttaacgagcgtgatgaatcttattatattgtatcttgcatcaaagac
tacttgcagcggggttacaaagcaaaagatgtcgccgtgctctatcgctctaacgcacaa
tcacgaattcttgaagaacgcttgatcgactcacaaattccttatcgaatctatggaggc
cagaaattcttcgagcgcgcagaaattaaagatgcgttagcttatttgcgattgattgca
aaccgccatgatgatgccgcatttgaacgtatagtcaatacaccaactcgtggcattggc
aataatacgttatcctcactacgagtaacggcacgcgaaaatgcagcctctctatggcaa
actgccgaatatttgctcgaagcaaacacattgaatgcacgcgccacaaatgcgcttggc
aactttattgagctcatcaatgccgtagatcgcgaaacaaaggacatggctcttggtgaa
caaacacaagccgtactggaacaaagtggtttgatcgcgcactataaaaaagatagaagc
gaaaaagggttatcccgtattgaaaacttggaagaattggtcaatgccacactgcaattt
aaagctgaaaacgatcttggcttgagcccattagcttcgtttttatcccatgttgcttta
gaaacaggcgaagaacaggccgaagcgcattctgatttcgtgagcttaatgacattgcat
gcagcaaagggtttagaatatcccatcgtttttattagtggcatggaagaagaattattt
cctcatcgcatgtcgatgaatgaaccaaacggtttggaagaagaacgccgactttgttac
gttggcatgacgcgtgctaaagaaaagttagtgctgacttatgccgaatgtcgttattta
cacggcatcgaacgatttagtcaaccctctcgttttattcatgaaatccccgatgaattg
atcgagtccatccgaccaacacccaaattatcacggccgacacctgttcgacccactgct
aaagttgaagtcgccggacagcctggattgcgagtgggtcaacgtgtacaacacaagaaa
tttggcgccggcgttctcatcaattatgagggacaaggtgagcacgcgcgcatacaagta
aaatttgataaggcgggcaccaagtggttagtggcaagctttgccaagttgacacccctt
taa
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