Clostridium chauvoei: BTM20_00165
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Entry
BTM20_00165 CDS
T05083
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cchv
Clostridium chauvoei
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_00165
Enzymes [BR:
cchv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTM20_00165
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
BTM20_00165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
ResIII
AAA_12
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ATD53768
LinkDB
All DBs
Position
34695..38441
Genome browser
AA seq
1248 aa
AA seq
DB search
MGETRWTKEQLQSITTRNCNLLVAAAAGSGKTAVLVERIIRIITNEENPIDIDRLLVVTF
TSAAAAEMRERIAAAISKALEENPNSKVLQRQLTLLSRSNITTMHSFCLDVIKNHFHTID
LDPSFRISDETENTLLKLEIINELFEDYYEEEDKDFKNLLESYSGYRDDEKLKDIVLDLY
RFSMSGPWPERWLLEKAEEFNINTLEELNNTEWIKVLKDNIAVEVSGYLSMLRKAVDIIN
ETEGLEPYLEAFISDIEALQNVYYSLDGGIEDLFKSLSSVEFIKLKVVRKNKVEDEEAQK
NVKNIRDGIKKKINKLIEDSFSMTPEESLDGIRNSYPYMKTLANITLEFSKRFAEKKKEK
NILDFNDLEHLCLKILIKVDENGDIKPSKVSESFREYFDEVLVDEYQDSNNVQETIIDLV
SRKTMENPNVFMVGDVKQSIYRFRQAKPELFLDKYNKYPLTEGEINRKIQLYKNFRSREE
VISGVNFIFKMVMSKTVGELEYTEEESLNLGASYKEINEDNVITAGPIELHILDKSGILD
EEDIEDYSDDNSSEEEEELDGITLEARIVAKRINDLINPKNGEVYKVIDKSTGEYRPLKY
KDIVILLRATKNWSEIFLDELGYEGIPVYADTGTGYFESIEIRTIMSLLKIIDNPMQDIP
MIAVLRSPIIGFTAEELADIRLLDKEKYYYEIISGIANSEYDVNSKLKGKCIELIRNLEV
WRKRAIYTPIDEFIWFLYMDTAYYGYVGAMPNGKLRQANLKILFQRAKQYEQTSFKGLFN
FINFINKLRKSSGDMGSAKILGENEDVVRIMSIHKSKGLEFPVVFTSGVGKQFNLMDLNN
PILYHDDLGFGPEYVDLEKRNAYSTLPKEAIKKRIRLETLSEEMRILYVAFTRAKEKLII
TGATSNLEKSISKWCSAAALDSELVLPSEVLKGKSYLDWIGMALCKHRDGNPLRDYIGAY
KDIITNDFSTWSVQFWNKNLLTVDKKNESVDESEERKLFITSEVEVVDKEIERRLGYKYK
YSASGTLPSNISVSDLKRAAYEEEDEDLRTVKIFGDKEEFKPRFLKEKKGLSGSEKGTII
HFVMQKLDLDKINTLEDIKQQIDNMKANELLTKEEASVIDCNKIKGFFDSDLGKRLLKAY
YSEGMLKREFPFFTEVSSLDIDKTLPKEIYKDEKIRLQGIIDCFFEEENEIVLLDYKTDY
VELGKEESMKEKYKIQIEYYKKAIEKVTGKRVKESYLYLFYLNKELKL
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaactagatggactaaagagcaattacaatcaataactacaaggaattgtaat
cttttagtagcggcagcagcaggatctggtaaaactgctgtattagtagaaagaataata
aggataataacaaatgaagaaaatcctatagatattgatagactattagtagttactttt
acatcagcagctgctgctgaaatgagggagagaatagcagctgctatttctaaagcatta
gaggaaaatcctaattctaaggtactacaaagacaattaacattattaagtaggtctaat
ataacaacaatgcattcattttgtttagatgtaataaaaaatcattttcatacaatagat
ttagatcctagctttagaatatctgatgaaacagaaaatactttattaaagcttgagatt
ataaatgaattgtttgaagattattatgaagaagaagataaggattttaaaaacttacta
gaatcttatagtggttatagagatgatgaaaagttaaaagatatagttttagatttatat
agattttctatgagtggaccttggccagaaaggtggttacttgaaaaagcagaggaattt
aatataaacactttagaagaattaaataatactgaatggataaaggtattaaaggataat
atagctgttgaagtaagtggatatttaagcatgctaagaaaggctgtagatataataaac
gaaactgaagggttagaaccttatttagaagcctttataagtgatatagaggctttacag
aatgtttattattctttagatggaggaatagaggatttatttaaaagtttatcatcagtg
gagtttataaagcttaaagtagttagaaaaaacaaagtagaagatgaagaagcacaaaaa
aacgttaaaaatattagagatggtataaagaaaaagataaataagcttatagaagatagt
ttttcaatgacaccagaagaatctctagatggtataaggaactcatatccatatatgaaa
acattagctaatataacattagagttttctaaaaggtttgctgaaaaaaagaaagaaaaa
aatatattagattttaatgacttagaacatttatgcttaaagatattaataaaagtagat
gaaaatggagatataaaaccttcaaaggtatcagaaagctttagagaatattttgatgaa
gtattggtagatgaatatcaagattctaataatgtacaagaaactataatagatttagta
tctagaaagactatggaaaatcctaatgtatttatggttggagatgttaaacaaagtata
tatagatttaggcaagcgaaacctgaattatttttagataaatataataaatacccatta
actgaaggtgaaatcaacaggaagatccaattatataagaactttagaagtagagaagaa
gttataagtggtgttaattttatatttaaaatggttatgtcaaaaacagttggagaatta
gaatatacggaagaagaaagcttaaacttaggtgctagttataaagaaataaatgaagat
aatgtaataacagcaggacctatagaacttcatatattagataaatcaggtattttagat
gaagaggatatagaggattatagtgatgataattcttcagaagaggaagaagaattagat
ggaattacattagaagctagaattgttgcaaaaagaataaatgaccttataaaccctaaa
aatggagaggtttataaggtaatagacaaaagtacaggagaatatagacctttaaaatat
aaagatatagtaatcttattaagagcaactaaaaattggtcagaaatattcttagatgaa
ttaggttatgaaggtattcctgtttatgcagatactggaacaggatattttgaatctata
gagataagaactataatgtctcttttaaaaattatagataatccaatgcaggatattcct
atgattgctgtattgagatcacctattataggatttacagcagaagagcttgcagatata
agacttttagataaggagaagtattattatgagattattagtggaatagctaatagtgaa
tatgatgttaattctaaattaaaaggaaaatgtattgagttaataagaaacttagaagtt
tggagaaaaagagctatatatactcctatagatgagtttatttggtttttatatatggat
actgcttattatggatatgtgggagctatgcctaatggtaagcttagacaagcgaattta
aaaatattatttcaaagagcaaagcaatatgagcaaactagttttaagggattatttaac
tttataaactttattaataagcttagaaaatcttcaggagatatggggagtgcaaaaatt
cttggggaaaatgaagatgtagttagaattatgagtatccataaaagtaaagggcttgag
ttccctgttgtatttacatcaggagtaggaaagcaatttaatcttatggatttaaataat
ccaattttatatcatgatgatttaggatttggtccggaatatgtggatttagaaaagaga
aatgcatatagtacacttcctaaagaagcaattaaaaaaagaatacgtcttgaaacatta
tcagaagaaatgagaattctttatgttgcatttacaagggccaaagaaaagttgataatt
acaggagcaactagtaatttagaaaaatctatatctaaatggtgttcagctgctgcttta
gattcagagttagtattaccttcagaggttttaaaggggaaaagttatttagattggatt
ggaatggctttatgtaagcatagagatggaaatccactaagggattatataggtgcatat
aaagatataataacaaatgacttttccacatggagtgtacagttttggaataaaaactta
ttaactgtggataagaaaaatgagtctgtggatgaaagtgaagaaagaaaactgtttata
acttctgaagtagaggttgtggataaagaaatagaaagaagacttgggtataaatataaa
tattcagcgtcaggaactttaccaagtaacatttcagtttcagatttaaaaagagcagct
tacgaggaagaggatgaagacttaagaacagttaaaatatttggtgataaggaagagttt
aagccaagattccttaaagaaaagaaaggtttatcaggatcagaaaagggtacgataatt
cattttgtaatgcaaaaacttgatttagataaaattaatactttagaggatattaaacag
caaatagataatatgaaagctaatgaattattaaccaaagaagaagcatcagtaatagat
tgtaataagataaaaggattttttgatagtgatttaggaaagagattactaaaagcctat
tatagtgaaggaatgcttaaaagagaattcccattctttacagaggttagtagcttagat
atagataagacattacctaaagaaatttataaagatgagaaaataagacttcagggaatt
atagattgcttttttgaagaagaaaatgaaatagtacttttagattataaaacagattat
gttgaattaggtaaagaagaaagtatgaaggaaaaatataaaattcaaatagaatattat
aagaaagcaatagaaaaagttacaggtaaaagagtaaaggaaagttacttatatttattt
tacttaaacaaagagctaaagctataa
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