Clostridium chauvoei: BTM20_01885
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Entry
BTM20_01885 CDS
T05083
Name
(GenBank) ATP-dependent helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
BTM20_01885
09124 Replication and repair
03420 Nucleotide excision repair
BTM20_01885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cchv03021
]
BTM20_01885
03036 Chromosome and associated proteins [BR:
cchv03036
]
BTM20_01885
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_01885
Enzymes [BR:
cchv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
BTM20_01885
Transcription machinery [BR:
cchv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
BTM20_01885
Chromosome and associated proteins [BR:
cchv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
BTM20_01885
DNA repair and recombination proteins [BR:
cchv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
BTM20_01885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
DEAD
PhoH
ResIII
Motif
Other DBs
NCBI-ProteinID:
ATD54051
LinkDB
All DBs
Position
390795..393089
Genome browser
AA seq
764 aa
AA seq
DB search
MENKIVIRESVRGIIEYILRAGHLDDRYTGKSRALEGTLAHQRLQASNEKIYSNYEKEVR
LEYTFAIEDALLKVDGRADGIIIEDNRIIIEEIKSTMKNLSLIDEDYNELHWAQAKFYSY
IYLVENNLSNIFIRLSYYNIETNEVKSFDKEFNIEELTSFIDYIVKEYSRWIKISSKLQV
LRNDSINKLDFPFETYRKGQRDLAVNCYNTIREKSVLFAQAPTGIGKTISTIFPAVKALG
SGMGRRIIYLTAKTITRTVAEEAFNKLEDKGLNFRNITLTSKEKICFQEKVTCNPDECRY
AVNYFTKVNDIIFEMLSNEKRFTREIIEKYAKKYEVCPFELSLDLSSWCDGIICDYNYAF
DPRVRLKRFFEEDLKSNILLVDEGHNLVNRARDMFSAELYKSNILNVSKLIKGIAPTLYK
ALSSINKEFIKIRKQVQEMEQDNIYQKEEFKNLYKLLRIALKEGDEYLVKAVGTKGYNDV
LELYFDMRSFVSISELYSNEYVTIVELDKSEVKVKLFCVNPSKNLASIVRGSYSTIIFSA
TLTPLNYYIDLLGGNEKSYRMKLPSPFKIENFKTYGYPLNMRYSMREKNIDNVCKLIKKF
ISEYSGNYMVFLPSYSYLNKVYSRYVELYQEEDIFCQGDTLSEEDRDAFINKFRENKNIT
AFCVVGGIFSEGIDLPGDMLIGSVVVGVGFPRISKEGDIIKDYYDDKGFDYAYVYPGINK
VLQAAGRVIRTEEDKGRLLLIDDRYFSLKYRTLLPKEWKIEKFK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaattgtaattagagaatcagttagagggataattgaatatattttaaga
gcaggtcatttagatgatagatatacaggtaaaagtagagctttagaggggacattagca
catcaaagattacaagctagtaatgaaaagatatattctaattatgaaaaggaagtaaga
ttagaatatacttttgctatagaagatgctttattaaaagtagatggtagagctgatggg
ataataatagaagataataggataataatagaagaaattaagtcaactatgaaaaattta
tctttgatagatgaagattataatgaattgcattgggcacaagcaaagttttattcatat
atatatttagttgaaaataatttaagtaatatctttattagattaagttattataatata
gaaacaaatgaagtaaaaagttttgataaagaatttaatatagaagaactaactagtttt
atagattatatagttaaagaatatagtaggtggattaaaattagtagtaaacttcaagta
ttaagaaatgattcaattaataaacttgattttccttttgaaacctataggaaaggtcaa
agagatttagcagttaattgttacaatacaataagagaaaagagcgttttatttgcacaa
gctcctacaggaataggaaagactatatcaacgatatttccagctgtgaaggcattagga
agcggaatgggtaggagaataatatatctaacagcaaagactataacaagaactgtagca
gaagaggcctttaataaactagaagataaagggttaaattttagaaatataactttaaca
tctaaggagaaaatatgctttcaagaaaaagtaacatgcaatcctgatgaatgtagatat
gcagttaattattttactaaagtaaatgacattatatttgagatgttatcaaatgaaaaa
agatttactagagagataatagaaaagtatgccaaaaagtatgaggtatgtccttttgaa
ttatcattagatttaagttcatggtgtgatggaataatatgtgattataattatgcattt
gatcctagagttagattaaagagattttttgaagaggatttaaaaagcaatatattatta
gtagatgaaggacataacttagttaatagagctagagatatgtttagtgcagaactatat
aaaagtaatattcttaatgtaagtaagttaataaaaggtatagcacctacattatataag
gctttatcttcaataaataaagagttcataaaaataagaaaacaagttcaagaaatggaa
caggataacatatatcaaaaagaagagtttaagaacctatataagctgcttaggatagct
ttgaaagagggagacgaatatttagtcaaagcagtaggaacaaaagggtataatgacgta
ttagagctttatttcgatatgagaagctttgtttcaatttcagagttatattctaatgag
tatgttactatagtagaattagataaaagcgaagtaaaagtaaagttattttgcgtaaat
ccttctaagaacttagcttccatagtaagaggaagttattcaacaataatattttcagct
actttaacgccactaaattactatatagatttattaggtggcaatgaaaaaagttataga
atgaaattaccatcaccttttaaaatagaaaattttaaaacctatggttatccattaaat
atgagatatagtatgagagaaaaaaacatagataatgtatgtaagttaattaaaaaattc
attagtgaatatagtggaaattatatggtttttttaccatcatactcttatttgaataaa
gtgtattcaagatatgtagagctttatcaagaggaagatattttctgccaaggagatact
ttgtcggaagaagatagagatgcttttattaacaagtttagggaaaataaaaatataaca
gctttttgcgttgtaggtggaatattttctgaaggtatagacttacctggtgatatgctt
ataggtagtgtagttgttggagttggatttcctagaatatctaaagaaggggatataata
aaggattattatgacgataagggctttgattatgcatacgtatatccaggaataaataaa
gtgctacaagctgctggaagagtaattagaactgaagaagataaggggagacttttactt
atagatgataggtattttagcttaaaatatagaacgttattgccaaaagagtggaaaata
gaaaagtttaaatag
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