Clostridium chauvoei: BTM20_02110
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Entry
BTM20_02110 CDS
T05083
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03030
DNA replication
cchv03430
Mismatch repair
cchv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTM20_02110
03430 Mismatch repair
BTM20_02110
03440 Homologous recombination
BTM20_02110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cchv03032
]
BTM20_02110
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_02110
Enzymes [BR:
cchv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTM20_02110
DNA replication proteins [BR:
cchv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTM20_02110
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTM20_02110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ATD54095
UniProt:
A0ABD4RKD4
LinkDB
All DBs
Position
440979..444539
Genome browser
AA seq
1186 aa
AA seq
DB search
MEKKFTHLHLHSEYSLLDSSGKIKKIISKAKELGMDSIAITDHGVMYGCVAFYKEAKDQG
IKPILGCEVYVAAKSMDIKINDKENSTHHLVLLVKNEKGYENLMEIVSEASIRGFYYKPR
VDHEFLRNHSEGLIALSACLGGEVQSWHLKDNYEKAKEVALLYKDIFKDGFYLEIQNHGM
EEQRKVMEENIKLSKELDIPLVATNDVHYINEEDSEAHDILMCIQTGKTIDDPNRRKYPS
NQFYLKSKEEMWSMFSHVKEALENTTKIAEECNFDYEFHVSKLPKFPLPEGREPYEYLRE
TCYLGLIERYDVFKDFLNKPLNVEEVVDFSKNNEEACGYVKRLEYELSVIRQMGYVDYFL
ITWDFIKYSNDNGIPTGPGRGSAAGSIVAFTLGITKIDPIKYSLLFERFLNPERVSMPDI
DSDFCYERRQEVIDYVVEKYGVNNVSQIITFGTMAPRACIRDVGRAMNYAYSEVDRIAKM
IPTMLGITIEKALELNPELKEAYDKEERVKTLIDVSKKLEGLPRHSSTHAAGVVIASKPL
VEYVPLQKNDESIVAQFDMTTLEELGLLKMDFLGLRTLTVMSDAVKMIKYNRGIDIDLDK
IDFEDKEVYKMIGEGKTAGVFQLESAGMTSFMKELKPDSLEDIIAGISLYRPGPMAEIPK
YIECKRNPGKLKYDTPQLEEILNVTYGVMVYQEQVMEIVRKLAGYSMGRSDLVRRAMSKK
KHKVMEEERKNFIHGITDENGNLEVPGCLRNGISEEIANKIFDSMMDFASYAFNKSHAAA
YAVIGYQTAYLMKYYPVETIAAMLNSVMGTSEKVAHYINFAESLGIQVLPPDINESYSKF
TVKGDKIRFGLAAIRNVGLNVVENIVYARDKKGRFESLVDFVNKIDLSAINKRAVESLIK
SGAFDEFKIFRSKLLAVYEKIMDGVSNEKKRNIDGQISLFGIAEEDLKAPEVNYPNIKEF
AKKHILAMEKEMTGLYLSGHPLDEYVQSLKMQTSTNIEKIFESYEILQETYNNEEIKVDI
IHDEEKVILGGIIAEVNQKITRSNTMMAFLKLEDLTGIIEVIVFPRTLDKVRELIKPDIL
VAIKGRVSIKEDELPKLICEAIDPLEKVNKTKVYLRTQNTNTGKELIKTIKETMPKEYKG
DTTVFMFTAEDKKQYRMSRDIWIDMESDAVDYFRKIVGEDNVKIMD
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaaaatttactcatcttcatctccattcagagtacagtttattagatagttca
ggaaaaataaaaaagataataagtaaggctaaagagctagggatggatagtatagcaata
acagatcatggagttatgtatggatgcgttgctttttataaagaagcaaaagatcaaggc
ataaagcctatactaggatgtgaagtttatgttgcagctaagtcaatggatattaaaatc
aatgacaaagaaaatagtacgcatcacctagttcttttagtaaaaaatgaaaaaggatat
gaaaaccttatggaaatagtatcagaagcttcaataagaggattttactataaacctagg
gtggatcatgagtttttaagaaatcatagcgaagggctaattgctttaagtgcatgttta
gggggcgaggttcagtcttggcacctaaaggataattatgaaaaagcaaaggaagtagca
cttttatacaaggatatatttaaagatggtttctatttagaaattcaaaatcatggcatg
gaagaacaaagaaaagttatggaggagaatataaagttatcaaaagaactggatattcca
cttgtagctactaatgatgtacattacataaatgaagaagattcagaagcacatgatata
ttaatgtgtatccaaacaggtaaaactatagatgatccaaatagaagaaaatatccttca
aatcaattttacttaaaatctaaagaagaaatgtggagtatgttctctcatgttaaagag
gcattagaaaacacaactaagattgcagaagaatgtaattttgattatgaattccatgtt
tctaagcttcctaaatttcctttaccagaaggtagagaaccttatgaatatttaagagaa
acttgttatttaggtcttatcgaaaggtatgatgtatttaaagatttcttaaataaacca
ctaaatgtggaggaagttgtggatttctctaaaaataatgaggaagcttgtggatatgtt
aaaagattagagtatgaactatcagtaatacgccaaatggggtatgtagattatttctta
attacatgggattttataaagtattcaaatgataatggaattccaacaggcccaggtaga
gggtcagcagcagggtctatagtagcctttactttaggtataacaaaaatagatccaata
aaatatagtttactttttgagcgttttttaaatcctgaaagagtaagtatgccagatata
gattcagacttctgttatgaaagaagacaagaggttattgattatgttgtagagaaatat
ggcgtaaataatgtatctcaaataataacctttggaactatggcaccaagagcttgtata
agagatgtaggtagagctatgaattatgcctattcagaggtagatagaatagctaagatg
attccaactatgcttggaataactatagaaaaagcacttgaattaaatccagaactaaaa
gaagcttatgataaagaagaaagagttaaaactttaatagatgtaagcaaaaaattagaa
ggattacctagacattcatcaacacatgcagcaggtgttgttatagcatctaaaccatta
gtggagtatgttccactgcaaaaaaatgatgaatctatagtagctcaattcgatatgacg
accttagaagaactaggattattaaaaatggacttcttaggtttaagaactttaacagta
atgagtgatgctgttaaaatgataaagtacaatagaggaatagatatagacctagataaa
atagactttgaagataaagaagtctataaaatgataggtgagggtaagacagcaggagta
ttccagttagaatcagcaggtatgacttctttcatgaaggaattaaagccagattctcta
gaggatataatagctggtatatcattatatagaccaggtcctatggcagaaatacctaaa
tatatagagtgtaaaagaaatccaggtaagcttaaatatgatacaccacaattagaagaa
atattaaatgttacttatggggtaatggtttatcaagaacaagtaatggaaattgttaga
aagcttgcaggatattcaatgggaagaagtgaccttgtaagaagagcaatgtctaagaaa
aagcataaagtcatggaagaagaaagaaagaactttattcatggtattactgatgaaaac
gggaatttagaagttccaggatgtctaagaaatggaatatcagaagagatagccaataag
atttttgactctatgatggactttgcaagttatgcttttaacaagagtcatgctgcagct
tatgcagtaataggatatcaaacagcatatttaatgaagtattatcctgtagaaacaata
gccgcaatgcttaactcagtaatgggaacaagtgaaaaagttgcacattatataaacttt
gcagaaagtttagggattcaagtgcttccccctgacataaatgaaagttattctaaattt
actgttaaaggggataaaataagatttggattagctgcaattagaaatgtagggttaaat
gttgttgaaaatattgtctatgcaagagataaaaaaggaagatttgaatcattagtggat
ttcgtaaataaaatagacttatcagcaattaataaaagggctgtagaaagtttaataaaa
tcaggagcttttgatgaatttaaaatatttaggtcaaagcttttagcagtttatgaaaaa
ataatggatggtgtttcaaatgaaaaaaagagaaatattgatggtcaaataagtttattt
ggtatagctgaagaagatttaaaagcaccagaagttaattaccctaatataaaagaattt
gcaaagaaacatattctagcaatggaaaaagaaatgacaggattatatttatcaggacat
ccattagatgaatatgttcaaagtttaaagatgcaaacaagtactaatatagaaaaaata
tttgaatcctatgaaatattacaagaaacgtacaataatgaagaaattaaagtagatatt
atacacgatgaagaaaaagtaatattaggtggtattattgctgaagtaaatcaaaaaatt
acaagaagtaatactatgatggcatttttaaagctagaagatttaacaggaataatagaa
gtaatagttttccctagaacactagataaagttagagagttaataaagccagatatatta
gtagcaattaaaggtagagttagcataaaggaagatgaacttccaaagcttatatgtgaa
gctatagatcctttagagaaagtaaataaaacaaaggtttatttaagaactcaaaatact
aatacaggaaaagaattaataaaaacaataaaagaaacaatgcctaaagaatataaaggt
gacacaactgtatttatgtttacagctgaagataaaaaacaatacagaatgtctagagat
atttggattgatatggaatcagatgcggtagattattttagaaaaattgttggggaagat
aatgtaaaaattatggactaa
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