Clostridium chauvoei: BTM20_04185
Help
Entry
BTM20_04185 CDS
T05083
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cchv
Clostridium chauvoei
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_04185
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BTM20_04185
Archaeal homologous recombinant proteins
BTM20_04185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
RNA_helicase
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATD54475
UniProt:
A0ABD4RK86
LinkDB
All DBs
Position
928182..931676
Genome browser
AA seq
1164 aa
AA seq
DB search
MKPIKLKIKGLNSFIEEQTIDFNKLTDRGFFGIFGPTGSGKSTILDGITLALYGEVSRKS
SNYINTNCDKLNVSFEFQISGSEVKKYLVVREFKRDKKTGNPISGKCKIIDITNEEEIIL
ADKVKSVTEKCKEIIGLSLEDFTRTVVLPQGKFSEFLKLEGKSRREMLERLFNLQQYGDN
LSRKLSREINKEKTENSVLLGQLMGYEDISEEKKNEKSEELKTSIENLDSVSNELKFIED
KFKENQELWNLQLEINEYKNKEEQLISKAEDIERIKKVIKLGESALKVNPYILTYEDIIR
NIEVTEKELKECMSNLENIKEKKLNIEEEWNNARLKKDKELPEYKIREQKVKDALEDRRI
LINLEKEIESLENKVKDLEKNQELNNKNLITIEGRIEKGNIVVEEEEKRRDSLKIDNEFK
NEVQKGLLITNSYEDILKREKDIKIKIEKINNGIKINNESEIKIKNQLDEKKKSLGENEK
NLEELIKNCPGNQNDLLELQKLNSESKKAWENFNKYNEEIDKYKKDVINYDIFLKENRER
HIKLKEEIEVLKADVKELQIENLANTLRKDLNEGKACPVCGSVEHHKENLKHVELKDVKA
LEKSIEEKEKTLNELQYEITKVETNKKITEERLEENKKSILDLGEDFKKYSVEQLEKKFI
ELEKNINNYNIQKENLEKLVTIFKEEYHSLDTKYKQIEARTEEGKKQLNNLKEEYEEVVK
ILKDNESKLNNIKDKTNVIDFKAKNDEIINKEKEREEAEINIKKYREKIEELITKKDTLV
NTLNNIRESLAREKSILQEKDKNRNEKILQIKNKIGDVDNIENLLTHIQEEMKKIENNFI
NIEKLKEEIEKNYQKYNDMIISLNTKNSELHKNRDRDKEKLDSILKEESFSSIEEVRNNI
INKNKINDFKIEIEKYNDELSKVKGTIENLIKKINNRVLTEEQWEKIKQEKDLKKKQVEE
LSKIKIKVEEEFKNIENKIKELEGLLKQKEKVEHKLALLNDLDKLFKGKKFVEFVAATRL
KYVSIEASKRLKDITNGNYALEVDENGKFIIRDYKNGGAERDASTLSGGETFIASLALAL
ALSTEIQLKGTAPLELFFLDEGFGTLDDNLLDIVMSSLEKIHNDKLKVGIISHVETIKNR
VPVKLILTPAESGKGGSKVKIERT
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaacttaaaataaagggattaaatagttttatagaagaacaaacaata
gactttaataaattgactgatagaggtttttttgggatttttggaccaactggaagtgga
aaatcaactatattagatgggataactttagctttatatggagaagtatctagaaagagt
tctaattatattaatactaattgtgacaaattgaatgtaagttttgaatttcagatatca
ggttcagaagtgaaaaaatatttagtagtcagagaatttaaaagagataaaaaaacagga
aaccccatatctggaaaatgtaaaataattgatattactaatgaggaagaaataatctta
gctgataaagtaaaaagtgttactgaaaaatgcaaagaaataataggattaagcttagaa
gattttactagaaccgtagttttaccacaaggaaaattttcagagtttttaaagttagag
ggtaaaagtagaagagaaatgcttgaaaggttatttaatctacaacaatatggtgataat
ttatcaagaaagctttcaagagaaataaataaagaaaagactgaaaatagtgtgctttta
ggacaactaatgggatatgaggatataagcgaagaaaagaaaaatgaaaaaagtgaagaa
ttaaaaacaagcatagaaaacttagatagtgttagtaatgaattaaaatttatagaggat
aaatttaaagaaaaccaagaactttggaatttacagttagagattaatgaatataagaat
aaagaagaacaacttatttctaaagcagaagatattgaaagaattaagaaggttataaaa
ttaggagaatcagcacttaaagtaaatccgtatattttgacatatgaagatattataagg
aatatagaagttacagaaaaagaattaaaagaatgtatgtcaaacttagagaatattaaa
gaaaaaaaattaaatatagaagaagaatggaataatgctcgattaaaaaaagataaagaa
ttacctgagtataaaataagagaacaaaaagttaaagatgctttagaagatagaagaatt
ttaataaatttagaaaaagaaatagaatcattagaaaataaagttaaagatttagaaaaa
aatcaagaattaaataataagaatttaattactatcgaaggtagaatagagaaaggaaat
atagttgtagaagaggaagaaaaacgtagagatagcctaaaaatagataatgaatttaaa
aatgaagttcaaaaaggattactcattactaatagttatgaagatatattaaaaagagag
aaagatattaaaattaaaattgaaaagattaataatggcataaaaattaataatgaaagt
gaaataaagataaaaaatcaattagatgaaaaaaagaaatctttaggagaaaatgaaaaa
aatttagaagaattaataaaaaattgcccgggaaatcaaaatgatttattagaattgcaa
aagttaaactctgaaagtaagaaagcttgggaaaattttaataaatataatgaagaaata
gataagtataagaaagatgtaataaattatgatattttcttaaaagaaaatagagagagg
catattaaattaaaagaagaaatagaagttttaaaggctgatgttaaagaattacagata
gaaaatttggcaaataccttaagaaaagatctaaatgaaggtaaagcttgtccggtttgc
ggatcagtagaacatcataaagaaaatttaaaacatgtagaattaaaagatgttaaagct
ttagaaaaaagcattgaagaaaaagaaaaaacacttaatgagcttcaatatgaaattaca
aaagtagaaacaaataagaaaataactgaggagagactagaagaaaataaaaaatcaata
ttagatttaggggaagactttaagaaatattcagtagaacaactagaaaaaaagtttata
gagttggaaaagaatattaataactataatattcaaaaagaaaatctagaaaaattagta
accatattcaaagaagaatatcatagtttagatacaaaatataaacaaattgaagcaaga
actgaagaaggaaagaaacagttaaataatttaaaagaagaatatgaagaagtagtaaaa
atattaaaagataatgaaagtaaattaaataatataaaagataaaactaatgtaattgat
tttaaagctaaaaatgatgagataattaataaagaaaaagaaagagaagaagccgaaata
aatattaagaaatatagagaaaagatagaggaattaattactaaaaaagatacattagtt
aatactttaaataatataagagaaagtttagctagagaaaaatcaatattacaagaaaaa
gataaaaatagaaatgaaaaaattctacagataaaaaataaaattggagatgttgataat
atagaaaatttgttaacgcatattcaagaagaaatgaaaaaaattgaaaataattttatt
aatattgaaaaattaaaagaagaaatagaaaagaattatcaaaaatataatgatatgata
attagtcttaatactaaaaatagtgagcttcataagaacagagatagagataaagaaaaa
ttagattcaatattaaaagaagaaagtttttcaagtattgaagaagtaagaaataatatt
ataaataaaaataaaataaatgattttaaaatagaaattgaaaaatataatgatgaatta
tcaaaagttaaaggtactatagaaaatttaattaagaaaattaacaatagagttttaaca
gaagaacaatgggaaaaaattaaacaagaaaaagatttaaagaaaaaacaagttgaagaa
ttgagtaaaataaaaattaaagttgaagaagagtttaaaaatatagaaaataaaataaaa
gagcttgaaggcttactaaagcaaaaagaaaaagttgagcataagttagcgttattaaat
gacttagataaattatttaaaggtaagaaatttgtagagtttgttgcagcaactagatta
aaatatgtttctattgaagcatctaaacgccttaaagatataactaatggtaattatgct
ttagaagtagatgaaaatgggaaatttataattagagattataaaaatggtggagcagaa
agagatgcatcaacactttcaggtggagagacatttattgcttcattagcattagcattg
gctttatcaacagaaatccaattaaaaggaacagctccattagagttattcttcttagat
gaagggtttggaacattagatgataatttattagacattgttatgagttcattagaaaaa
atacacaatgacaaattaaaagtaggaataataagtcacgtagagacaataaaaaataga
gtcccagtaaaattaatattaacaccagctgaatcaggtaagggtggaagtaaagttaaa
atagagagaacttaa
DBGET
integrated database retrieval system