Clostridium chauvoei: BTM20_06895
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Entry
BTM20_06895 CDS
T05083
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTM20_06895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchv03019
]
BTM20_06895
03016 Transfer RNA biogenesis [BR:
cchv03016
]
BTM20_06895
Enzymes [BR:
cchv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BTM20_06895
Messenger RNA biogenesis [BR:
cchv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BTM20_06895
Transfer RNA biogenesis [BR:
cchv03016
]
Prokaryotic type
tRNA degradation factors
BTM20_06895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
ATD54978
UniProt:
A0ABD4RJN1
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All DBs
Position
1510265..1512388
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AA seq
707 aa
AA seq
DB search
MNNIMKTNIAGRELKIEFGKVGMLSNVAAFMSYGDTVILTNVNASEKPRDGIDFFPLSVE
YEERLYSVGKIPGGFIKREGRPSENAILFGRAVDRPLRPLFPKGYRNDVQVVCTVVSVEK
DNLPEILAINAASMALCLSSIPFKTPVAAVQVGLIDGNFILNPTSKEREESILQLTVCAT
KERVMMIEAGGHEIPEDVMISAIEYGFEKCQDIVKFQEEAMAKYGKEKITPELFTVNEEL
EAETRAFASEMIKKAMWIADKDERNAAMDEINEKVYAEFEEKYPDNLGDLKEILYSMQKE
VVRDMLLNHHRRPDERAFDQVRPISCEVGILPRTHGTGLFTRGLTQVMTVATLGAVGDIQ
IIDGIGEAESKRYMHHYNFPAYSVGEVRPLRGPGRREIGHGALAERALEPLIPSEEEFPY
TIRLVSEVLSSNGSTSQASVCGSTLALLDAGVPLKRPAAGIAMGLITSEDLSEEEVLTDI
QGIEDFFGDMDFKVAGTTEGITSIQVDTKIKGLSFKVIEDAIKGARKARLHILDKIENCL
PSAREEVSNYAPKTSIINIDPEKIRDVIGAGGKVINKIIDETGVKIDIKEDGTVFVSSPD
HDGVNKAISIIEGLTKEVKVGEIYLGKVIKIATFGAFIEILPNKEGLCHISKLDKARVNK
VEDIVSVGDEILVKVTEIDNQGRINLSRKDALVDESNTDEKVDEKSE
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatataatgaaaacaaatatagcaggaagagagctaaagatagaatttggtaaa
gttggtatgttatcaaatgtagcagcttttatgagctatggagatacagttattttaaca
aatgtaaatgcttcagaaaaacctagagatggtattgactttttcccattaagtgtagaa
tatgaagaaagactatactcagtaggtaaaatcccaggtggatttataaaaagagagggt
agaccttcagaaaacgcaattctttttggaagagctgtagatagaccgttaagaccatta
tttccaaagggatatagaaatgatgtgcaagtagtatgtacagtagtttcggttgaaaaa
gataacttaccagaaatattagcaattaatgcagcatcaatggcattatgtttatcaagc
attccttttaaaacacctgttgcagcagtgcaagtaggtctaatcgatggaaactttatt
ttaaatccaacatcaaaagaaagagaagaaagcattcttcaattaacagtttgtgcaact
aaagaaagagttatgatgattgaagcaggtggacacgaaatacctgaagatgttatgatt
agcgcaattgaatatggatttgaaaaatgtcaggatatagttaaattccaagaagaagct
atggctaaatatggaaaagaaaaaattacacctgaattatttactgtaaatgaagagtta
gaagctgaaacaagagcctttgcatcagaaatgattaaaaaagctatgtggatagcagat
aaagatgaaagaaatgctgccatggacgaaataaatgaaaaggtttatgcagaatttgaa
gaaaagtacccagataatctaggagatttaaaagaaatattatatagcatgcaaaaagaa
gttgttagagatatgcttttaaatcatcatagaagaccagatgaaagagcttttgatcaa
gttagaccaatatcatgtgaagtaggaatacttccaagaactcatggtacagggttattt
acaagaggtttaactcaagtaatgacagttgctactttaggtgcagttggagatattcaa
ataatagatggtataggagaagcagaatcaaaaagatatatgcatcactataatttccct
gcttattcagtaggagaagttagaccacttagaggaccaggtagaagagaaataggtcat
ggagctttagctgagagagcattagaaccattaattccttcagaagaagaattcccatac
acaataagattagtttcagaagtacttagttcaaatggttctacttcacaagcttcagtt
tgtggaagtacattagcacttttagatgcaggtgtaccacttaagagaccagcagctggt
atagcaatgggacttataacttcagaagatctttcagaagaagaagttttaacagatata
caaggaatagaagatttctttggagatatggactttaaagtagctggtactacagaagga
ataacatcaattcaagttgatactaaaataaaaggattaagctttaaggttattgaagat
gcaattaagggtgcaagaaaagctagacttcatattttagataagatagagaattgtctt
ccatctgcaagagaagaagtatcaaattatgctcctaaaacatcaataataaatatagat
ccagaaaagataagagatgttataggtgctggtggtaaagttataaataaaataattgat
gaaactggcgttaagatagatataaaagaagatggaacagtatttgtatcatcaccagat
catgatggtgtaaataaagctataagtataattgaaggtttaacaaaagaagttaaagta
ggagaaatatacttaggtaaagttattaagatagctacatttggtgcttttatagaaata
cttcctaataaagaaggtttatgccatatttcaaaattagataaagctagagtaaataaa
gttgaagatattgtttcagtaggagatgagattttagttaaagtaactgaaatagataac
caaggaagaataaacctttcaagaaaagatgctttagtagatgaatcaaatactgatgaa
aaagtagatgaaaaatcagaataa
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