Clostridium chauvoei: BTM20_08810
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Entry
BTM20_08810 CDS
T05083
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cchv
Clostridium chauvoei
Pathway
cchv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cchv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BTM20_08810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cchv03019
]
BTM20_08810
03400 DNA repair and recombination proteins [BR:
cchv03400
]
BTM20_08810
Enzymes [BR:
cchv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BTM20_08810
Messenger RNA biogenesis [BR:
cchv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BTM20_08810
DNA repair and recombination proteins [BR:
cchv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BTM20_08810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Helicase_Sgs1
Radical_SAM
ANAPC2
LRR_NXF1-5
DUF6395
Motif
Other DBs
NCBI-ProteinID:
ATD55331
UniProt:
A0ABD4RHK9
LinkDB
All DBs
Position
complement(1914436..1916871)
Genome browser
AA seq
811 aa
AA seq
DB search
MTNKALEILEKVYGYKSFRKGQEDIINNILNRKDVLAIMPTGGGKSICYQIPSLILDGIT
IVISPLISLMKDQVDAIKEMGINGVYINSSLSTIEFNSIIDGIRSNKYKIIYVAPERLDS
NEFITAITQNNISQVAIDEAHCVSQWGHDFRSSYKRIDNFINKLPKRPIVSAFTATATNE
VKEDIIKLLGLKEPKVFITGFDRENLTINIIKSGNKKDYLINYIENNKDQSGIIYAATRR
EVDKIYDELKNRGYEVGKYHAGLSDEVRKEYQDNFIHDNLNIIVATNAFGMGIDKPNIRY
VVHYNMPKNIEGYYQEIGRAGRDGEKSECILLFAPGDVQVQKYLIEMSIENQERKNNQYE
KLQQMVDLVYSNGCLRNYILNYFGDRKEEPCNNCSNCLYKGEVIDKTIDAQKVLSCVYRM
KRSFGSTMVVDVLRGSKNKKVSQFGFDNISTYGIMKDYSNEDLKTFINTLVAQGYLDLVQ
GTYPTLKLNNLSMKVLKSEKEVKLKEFKVERKLKDTNKLFEILKVLRLNISRKENLPPYI
IFGDGTLREMSIKYPIQKEDMLKISGVGEGKYNKYGIYFREEIEKYVKENNIDIDKNNNV
ESDLSDFPFEVVTDKGLLEELLNLRDKFAKKEGVPRQKILAKNSLKEISGRYPMNIEELK
DIGGVGSKKIELYGDEIIEKVKTYVSEKNIQVHWTEKKRRKLIIDGETRGNDEIALDSLK
EGKKLEDISEEIEISISTILGYVADYIKETGDSNFSLDLKKYYNAEDRDNILKACNKNGY
DKISIIKKQLSDTIKYEAIRAVILEEYFKVS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
ttgactaataaagcactagagattttagaaaaagtttatggatataaaagttttagaaaa
gggcaagaagatataattaacaatatactaaatagaaaagatgttttagctataatgcca
actggtggaggaaaatctatatgttatcaaattccatcccttatattagatggaattact
attgttatatcacctttaatatcattaatgaaggatcaagtagatgcaattaaagaaatg
gggataaatggtgtatatataaatagttctttaagcacaatagaatttaattctattatt
gatggaattagaagtaataaatataaaataatatatgttgctccagaaagactagattca
aatgaatttataacagcaataacccaaaataatataagtcaagtggcaatagatgaagct
cattgtgtatcacaatggggacatgattttagatcaagctataaaagaatagataatttt
ataaataaattacctaaaagaccaatagtatcagcttttacagccacagctactaatgaa
gttaaagaagatattataaaattattagggcttaaagagccaaaggtatttataactggt
tttgatagagagaacttaactataaatataataaaatcaggtaataagaaagattattta
ataaactatatagaaaataataaggatcagtcaggaataatatatgcagcaaccagacga
gaagtagataaaatttatgatgaactaaaaaatagaggatatgaggttgggaaatatcat
gcaggtttatctgatgaagttagaaaagaatatcaagataactttattcatgataactta
aatataatagttgcaacaaatgcttttggaatgggtatagataaaccaaatataagatat
gtagttcattataatatgcctaaaaacatagaaggatattaccaagagatagggagagca
ggtagagacggagaaaagagtgagtgtatattactatttgccccaggagatgttcaagta
caaaagtatctaattgaaatgagtatagaaaatcaagaaagaaaaaataatcaatatgaa
aaattacagcaaatggttgatttagtttatagtaacggttgcctaagaaattatatatta
aattattttggcgataggaaagaagaaccatgcaataattgtagtaattgtttatataaa
ggtgaagttatagataaaaccatagatgcacaaaaggttctttcttgtgtctatagaatg
aaaagaagctttggaagtacaatggtagtagatgttcttagaggatcaaaaaataaaaag
gtaagtcagtttggttttgataacatatctacttatggaataatgaaggattattccaat
gaagatcttaaaacttttataaatactttagttgctcaaggatatttagatttagttcag
ggaacatatcctacattaaagcttaataatttatctatgaaggtattaaaaagtgaaaaa
gaagttaaattaaaagaatttaaagtagaaagaaaacttaaagatactaataagctattt
gagattttaaaagttttaagattaaatatttcaaggaaagaaaatcttccaccgtatatt
atttttggagatggaactttaagagaaatgagtattaaatatcctattcaaaaagaggat
atgcttaaaatatcaggggtaggagaaggtaagtataacaaatatggaatttattttaga
gaagaaatagaaaaatatgttaaggaaaataatatagatatagataaaaataataatgta
gaaagtgacttatctgattttccttttgaagtagttacagataaaggtttattagaagaa
ttattaaatttaagagataagtttgctaaaaaagaaggtgtacctagacaaaaaatatta
gctaagaattcacttaaggaaataagtggaagatatccaatgaatatagaagaattgaaa
gatataggtggagtagggtctaaaaagatagaattatatggagatgaaattatagaaaag
gttaaaacttatgttagtgaaaaaaacatacaagtacattggactgaaaaaaagagaagg
aagctaataattgatggtgaaacaagagggaatgatgaaatagctttagatagtttaaag
gaaggtaagaaactggaagatatatcagaggaaatagaaatatcaatttcaactatatta
ggttatgtagctgattatataaaagagacgggagactcaaactttagtttagatttaaaa
aaatattataatgcagaagatagagataatatattaaaagcttgcaacaaaaatggatat
gataaaataagcataataaaaaagcaattatctgatactataaagtatgaagcgattaga
gcagttattttagaagagtattttaaggtatcttaa
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